Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01512 ATGGAAGGCAGAGGTGTAACCACTGTAATGATTGCGGTTCAGGTTTTGCATGTAGGTTTGAACACACTGATAAAAGCCTCCATATCTAAGGGAATGAGCAATTTTGTTTTTGTTGCGTATTCAGACCTCCTTGCATTCTGTTTCCTTGTACCATCAACCGTAATCTATCACAGAAACAGAGCTCCTCCACCAATTAATATATGGATCGTCTTCAGAATGTTTGTTATTGGCGTGCTCAGCATTTCCTCACAGACACTTCTCTATACTGGACTGCGCTATAGCTCTCCCACTCTGTACTCTACCATGGAGGATCTTATTCCAGCTTATACTTTCATAATTGCTATTATAACCAGGATGGAAAAGCTGGATCTAAAACTACCAAGTTGCCAGGCAAAATCCATTGGCACTATGGTCTCCATTGCAGGAGCATTAACCGTGACTTTATACAAAGGGTTGCCTCTAACTCGCGCTGTTGTGCCATTGCCAAACAATGTGCTAGGTGGGACTTTCCTCTCATCCCAGCAATCAGAATGGCTACTAGGAGGCTTTCTCCTTATAGCTGGTACCTTTAGTGCTTCAGTCACACTTATCTTCACGGTGCAGACCTACAAAGACTATCCTGCAGAGCTAATGATGACAACCATTTCTTGCAGTTTCGTTGTTCTCCTATCATTCATAGTAGCTTTCATTGCTGAGCAAAATCCCAACGCATGGATACTCAAACCTGATTTCAACTTGCTAACTATATTCTTCACGGCAATTTTTTCGATATCTATGCGAAGTGTGGTGTATACATGGGCTTGTCGCAAGAAGGGGCCTGTATATGTTGCTATGTTCAACCCTTTAGGAATTGTTATTGCACTTGCCATGGGGGTTCTATTTCTCGGAGATGGTCTATATCTTGGAAGTATGATAGGAGCTGCTATAATAGCTAGTGGGTTTTATGCTGTGTTATGGGGCCAGAATAAAGAGGAAAAGATGATTCGTGAAAAACATGAAGAAACCAGCAACATCATCTCATCGTCTTCTTCTGCAGCCCCTCTGTTGCTCAACAAAGACAAGGACAATAGTACTTTTGTATGA 1083 0.422 MEGRGVTTVMIAVQVLHVGLNTLIKASISKGMSNFVFVAYSDLLAFCFLVPSTVIYHRNRAPPPINIWIVFRMFVIGVLSISSQTLLYTGLRYSSPTLYSTMEDLIPAYTFIIAIITRMEKLDLKLPSCQAKSIGTMVSIAGALTVTLYKGLPLTRAVVPLPNNVLGGTFLSSQQSEWLLGGFLLIAGTFSASVTLIFTVQTYKDYPAELMMTTISCSFVVLLSFIVAFIAEQNPNAWILKPDFNLLTIFFTAIFSISMRSVVYTWACRKKGPVYVAMFNPLGIVIALAMGVLFLGDGLYLGSMIGAAIIASGFYAVLWGQNKEEKMIREKHEETSNIISSSSSAAPLLLNKDKDNSTFV. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01512 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 149 - -
Seca10g01512 360 Pfam EamA-like transporter family 10 146 IPR000620 GO:0016020
Seca10g01512 360 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020
Seca10g01512 360 PANTHER WAT1-RELATED PROTEIN 8 332 IPR030184 GO:0016020|GO:0022857
Seca10g01512 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01512 Seca-Chr10 16395074 16399513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01512 8 356 Nodulin-like Gene Family AT3G28050 40.000 4.77e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01512 - - gmx:100814600 475.707