Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01510 ATGGAAGAACATCTTACTCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCTCAGTGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGGAGGAATTGGATATTGGTCTGGGAAGATGGTTTCTGCAATTTTGCTGCCTCAGCAGCACCTGAAATTAACTCTGGCGATTGTCCTTCCTCATCTGTTTATGGGAACTGTGAATACCAGCCCTACCAAGGCCTTCAACCTGAGCTCTTCTTCAAGATGTCACATGAGATCTATAACTATGGAGAAGGGTTGATAGGAAAAGTAGCTGCAGATCACAGTCACAAGTGGATATACAAAGAACCTAATGATCAAGAAATCAACTTCCTGTCAGCATGGCACAATTCAGCAGACTCAGTAAGGAAAAAAAAAATTCAAACACCCCCTATATATCTTGCTTATATATTCTTCTTACAGAGTGAGCATTAA 543 0.4236 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGDCPSSSVYGNCEYQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSVRKKKIQTPPIYLAYIFFLQSEH. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01510 180 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 158 - -
Seca10g01510 180 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 164 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01510 Seca-Chr10 16350235 16351300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01510 13 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 26.866 9.69e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01510 - - vun:114173114 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01510 10 16350235 16351300 Seca10g01510 10 16350235 16351300 ECH