Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01507 ATGGGTTGCAAAGATATGGCTAAGGTGAAGTGGAGGAGGAAGAGAAGGAAGCAAAGGAAGGAGAAGTTTACTATTGAAAGGAAAATGAAGAAGTTGCAACGGCTGGTTCCCGGCGGGAGCAACCTCAAGGCGGACCGGCTTTTCCTCCGGACGGCGGAACACATCTTGCAACTGAGGTTTCAGCTTAATGTGTTGGAAGCTCTTTCCAACATATATATATTTAAGCCATAA 231 0.4632 MGCKDMAKVKWRRKRRKQRKEKFTIERKMKKLQRLVPGGSNLKADRLFLRTAEHILQLRFQLNVLEALSNIYIFKP. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01507 76 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 72 IPR044660 GO:0006355
Seca10g01507 76 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01507 Seca-Chr10 16306150 16306380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01507 10 68 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 32.787 8.26e-06 39.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01507 - - pvu:PHAVU_003G053700g 100.523