Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01499 ATGGAAAGTGATGGGATTGAAGAGAGCAGTGTGAGGTTGTTGCATAGTGGTAGCAATGATGGGAGTATTGAGTCTAATAGGTGGGTTGATGGCAGTGAAGTGGACTCTGTGGAGGCTCTTTCATGGTCTAATGAGGAGCAAGGATCAATCAGAAGGAGGCTTACTAAGAAGCCTAAGAGAGTTGATTCATTTGATGTTGAAGCCATGGAGATTGCTGGGAAACATGATCACCATTCCCAGGATGCTTCCCTCTTGCCCACTCTTGCATTAGCATTTCAGACTCTTGGTGTGGTATATGGTGACTTGGGAACAAGTCCTCTCTATGTTTTTGCTGATGTCTTCAGCAAGGTTCCAGTTGAATCAGATGTTGATGTCCTTGGAGCATTGTCATTAGTAATGTACACAATAGCACTTCTTCCCTTGGTGAAGTATGTTTTTATAGTCCTCAAAGCAAATGACAATGGAGAAGGAGGAACATTTGCACTATACTCGCTGATTTGCAGATATGCAGATGTGAATCTGCTTCCAAATCGTCAGCCAGCTGATGAACGTATCTCTAGTTTTAGGCTCAAACTACCCACTCCAGAGCTGAAGAGGGCCTTAAACATAAAGGAGATTTTGGAAAAGAAGTCTACTTTGAAAACCCTTTTGCTGCTACTGGTTTTGCTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGGCTGCAGGGTGAAATAAACGGATTTAGTTCAAATACAGTGGTTATTGTTTCAATTATAGTCCTGGTGGCTTTATTCAGCATACAACGGTTTGGTACCAGTAAAGTGGGTTTCATGTTTTCCCCTATACTTGCTCTATGGTTCTTTTCTCTGGGCTCTATTGGAATTTATAATATAGCTAAGCATGATGCTATTGTTCTGAGAGCATTCAATCCCACTTATATTTATTACTTCTTTAAGAAGAATGGCAAAAATGCATGGTCAGCTCTTGGTGGTTGTGTTCTGTGTGTTACAGGTTCAGAAGCAATGTTTGCTGATCTGGGTCATTTTTCTGTAAGAGCAATACAGATTGCCTTCACTTTCGTGGTATTTCCCTGTCTTCTCCTTGCATATATGGGTCAAGCTGCTTATTTGCTGAAGAATCCTTCTTCTTATTCAAATATATTCTATGATTCTGTTCCAGTAATCAAGTTGGTTCCTTCTGTCTGTGCTTTGTGTGAAACAGATAGTCTCTTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGCATAAAGCAATCTATGGCTTTGGGATGCTTTCCCAGGCTCAAGATAATTCACACCTCAAGGAAGTTCATGGGTCAAATTTACATCCCTGTAATTAACTGGTTTCTAATGGTCATGTGCATAGTTGTCATTTCCATCTTCCGAAGCACTACTGACATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTTAGCACCACCTTAGTGACACTTGTAATGCTTTTAATTTGGCAGACTAACTTGTTTTTGGTATTTTCCTTCCCACTTATATTTGGATCAGTAGAGCTTGTTTACATGTCTTCAGTCCTAGCAAAACTCTTAGAAGGTGGCTGGCTTCCACTTGTCTTTGCTACCTGTTTCCTCTCAGTGATGTACATATGGAACTATGGAAGTGTGTTAAAGTACAGAAGTGAAGTTAGGGAGAAGATTTCAATGGACTTGATGCTTGATCTTGGCTCCAATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGCTATATACTGAGCTTGTTCAAGGCATTCCCTCCATTATTCTACAGTTCTTGCTTAGCCTTCCAGCTCTTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTCCCTATCCCAGTGGTTCCTCAAGAGGAAAGGTTTCTATTTAGAAGAGTTTGTCCAAAAGATTACCACATGTTCCGATGTGTTGCCAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCAAGCATTTGAGCAACTTCTTATTGAAAGTCTTGAGAAATTCTTGAGAATGGAGGCTCAAGAAACTGCCTTAGAGAGCAGTGCTGAAGAAATGGACAGTGTCTCAATGAAATCCAAGGATTCTGATCTTCCTGCTTATAATGGGGCTGATGAACTAAGGATTCCATTGATTTGTGGTCAAAATTCTGAAGAAATTGGAGGTTCTGGCTCTCAAGAAGTTGATGCAACATTACCATCAAGTTATATGTCATCATATGAAGATCCTAGTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAACAGCATCAGGATGCACCTATTTACTTGGACATGGGGATGTGAGAGCAAAGAAGAACTCTGTGTTCTTTAAGAAATTGGTGATAAATTATTTCTATGCATTTCTCAGAAAGAATTGCAGAGCAGGTACTGCTACCATGAGGGTACCTCACACCAATATCATTCAAGTGGGGATGACTTATATGGTCTAA 2541 0.4057 MESDGIEESSVRLLHSGSNDGSIESNRWVDGSEVDSVEALSWSNEEQGSIRRRLTKKPKRVDSFDVEAMEIAGKHDHHSQDASLLPTLALAFQTLGVVYGDLGTSPLYVFADVFSKVPVESDVDVLGALSLVMYTIALLPLVKYVFIVLKANDNGEGGTFALYSLICRYADVNLLPNRQPADERISSFRLKLPTPELKRALNIKEILEKKSTLKTLLLLLVLLGTSMIIGDGILTPAISVMSAISGLQGEINGFSSNTVVIVSIIVLVALFSIQRFGTSKVGFMFSPILALWFFSLGSIGIYNIAKHDAIVLRAFNPTYIYYFFKKNGKNAWSALGGCVLCVTGSEAMFADLGHFSVRAIQIAFTFVVFPCLLLAYMGQAAYLLKNPSSYSNIFYDSVPVIKLVPSVCALCETDSLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMVMCIVVISIFRSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLVFSFPLIFGSVELVYMSSVLAKLLEGGWLPLVFATCFLSVMYIWNYGSVLKYRSEVREKISMDLMLDLGSNLGTVRVPGIGLLYTELVQGIPSIILQFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHQAFEQLLIESLEKFLRMEAQETALESSAEEMDSVSMKSKDSDLPAYNGADELRIPLICGQNSEEIGGSGSQEVDATLPSSYMSSYEDPSLEYELSALREATASGCTYLLGHGDVRAKKNSVFFKKLVINYFYAFLRKNCRAGTATMRVPHTNIIQVGMTYMV. 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01499 846 MobiDBLite consensus disorder prediction 12 26 - -
Seca10g01499 846 Pfam K+ potassium transporter 91 678 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca10g01499 846 NCBIfam potassium uptake protein 90 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca10g01499 846 MobiDBLite consensus disorder prediction 1 27 - -
Seca10g01499 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 78 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01499 Seca-Chr10 16198654 16203701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01499 4 846 Inorganic Solute Cotransporters AT1G60160 73.005 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01499 K03549 - gmx:100814419 1275.77