Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01458 ATGTCCACTTGTAGGGGTTATATGGCTCCAGAGTACATAGTTCTAGGGAAGTTAACTGAGAAAGCAGATGTGTACAGTTTTGGAGTTCTAGTTATTGAGATTGTATCTGGAAAAAGTTGCAGATCCGTTGTTCAAGATTCATGTTCCATCCTACACACGGTTTGGAGCCTTTATGGATCAAATAAGCTATGTGACATTGTTGATCCAATCTTAGAGGGAAATTATCCAGCAGAGGAAGCATGCAAACTCCTTAAGATAGGGCTGCTTTGTGTACAAGCATCTGCAGAGCTGCGACCACCAATGTCAGTTGTTGTAAAAATGATTACTAACAATCATGAAATTACTCAGCCAACACAACCACCGTTTCTTAATGGTGGTAGTGCTGAATTCAGCAATTCTACTTCACTAGGAGATAGCTTTCAGCCTGGATCCTACATTCAGTCTTCAGGGGATGGCATGATCCAAAGTAGATCTGAATCATCTGATAGATTGATTAGTCTATAA 504 0.4028 MSTCRGYMAPEYIVLGKLTEKADVYSFGVLVIEIVSGKSCRSVVQDSCSILHTVWSLYGSNKLCDIVDPILEGNYPAEEACKLLKIGLLCVQASAELRPPMSVVVKMITNNHEITQPTQPPFLNGGSAEFSNSTSLGDSFQPGSYIQSSGDGMIQSRSESSDRLISL. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01458 167 Gene3D Transferase(Phosphotransferase) domain 1 2 120 - -
Seca10g01458 167 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g01458 167 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 136 - -
Seca10g01458 167 MobiDBLite consensus disorder prediction 146 167 - -
Seca10g01458 167 Pfam Protein tyrosine and serine/threonine kinase 7 106 IPR001245 GO:0004672|GO:0006468
Seca10g01458 167 SUPERFAMILY Protein kinase-like (PK-like) 5 130 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01458 Seca-Chr10 15669744 15670367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01458 6 149 Receptor kinase-like Gene Family AT4G11460 37.838 1.76e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g01458 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01458 - - gmx:100802190 228.024