Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g01446 | ATGGCTTCTCTTTCTCAACTTCTTTCTCTTCTCCTCCCTCTGCTGGCAGCTTCATTGATTCCAAGTGTGTTTTCCCTTGATGTTTCAATCAAAACAACATACTTGGAACCCTTTAAATGCTCACCAAAAATTAGGACATGCAATGCCTCACTCTACCACATAAGCAATGATTACAAGATAAACGAAATAGCCTACTTTTACTCTGTTAATTCTTCCCAAATCAAACCCATAATGCGTGGCACCAAACAAGATTACCTCATAACAGTACCTTGTTCTTGCAAAAACACCATTGACCTTAGCGGATATTTCTATGATACAAACTACACAGTGAAGACTAATGAAAATTTTGTGGATATTCAAAAGCTGATTTACAGTGGGCAAGCTTGGCCTGTTAAGGAAGATTTGATCCCAGATGAGAATATAACAATACATATCCCTTGTGGGTGTTCAGAAAGTGACTCACAAATTGTTGTCACATATACAGTGCAGAGGAATGATACACTAACATTAATTGCTCATCTGCTAAATTCAACAGTTGATGGCATGGTGAATATGAACCAAGTTATGGCTCCCAACCCCACATTCATAGATATTGATTGGGTGTTATATGTTCCCAAGGAATTAAATCCACTTTCCAATGGAAAAGAGAAGAAACATGAGTTGGTGACAATTATTGGCATCTTAGTGGGTGTGACACTGCTTTTAATCATTACATTGATCATTCTCATTCTCACAAGAAATAAAGCCTATGAAACCTGCAAAAATGATCCAAACGCTGTCTCTAAAAGAACAATTGCCAATAGAAGTACTATTTCCTTAAAGAACCGTGAATTTCTTACAGAATGCATGGAAGATGGAACACAATTTGACTCAGAGAGGCCAGTAATTTATACCCTTGAGGAGATTGAACATGCTACAAATAACTTTGATGAAACTCGAAGAATTGGAGTTGGTGGATATGGGAGTGTGTATTTTGGAATGTTAGGGGACAAGGAGGTTGCTGTGAAGAAGATGAGGTCTAACAAATCCAAAGAATTCTATGCAGAACTCAAGGCCTTGTGTAAGATCCATCATATTAACATTGTGGAGTTGTTGGGATATGCCAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAGTGGATCTCTAAGTGAACATCTTCATGATCCATTGCTGAAAGGTCACCAGCCTCTTTCATGGTGTGTTAGGCTTCAAATTGCATTGGATGCAGCAAAAGGCATTGAATACATACATGATTACACCAAAGCACGATATGTGCACCGTGATATAAAGACTAGTAATATTCTTCTTGATGAGAAGCTCAGAGCAAAGGTAGCAGATTTTGGGCTTGCAAAACTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCGCCAGAGTAG | 1443 | 0.3867 | MASLSQLLSLLLPLLAASLIPSVFSLDVSIKTTYLEPFKCSPKIRTCNASLYHISNDYKINEIAYFYSVNSSQIKPIMRGTKQDYLITVPCSCKNTIDLSGYFYDTNYTVKTNENFVDIQKLIYSGQAWPVKEDLIPDENITIHIPCGCSESDSQIVVTYTVQRNDTLTLIAHLLNSTVDGMVNMNQVMAPNPTFIDIDWVLYVPKELNPLSNGKEKKHELVTIIGILVGVTLLLIITLIILILTRNKAYETCKNDPNAVSKRTIANRSTISLKNREFLTECMEDGTQFDSERPVIYTLEEIEHATNNFDETRRIGVGGYGSVYFGMLGDKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPSGSLSEHLHDPLLKGHQPLSWCVRLQIALDAAKGIEYIHDYTKARYVHRDIKTSNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPE. | 481 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g01446 | 480 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 37 | 480 | IPR044812 | GO:0019199|GO:0045087 | |
Seca10g01446 | 480 | Pfam | Protein kinase domain | 310 | 480 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g01446 | 480 | ProSiteProfiles | LysM domain profile. | 158 | 204 | IPR018392 | - | |
Seca10g01446 | 480 | ProSitePatterns | Protein kinases ATP-binding region signature. | 315 | 337 | IPR017441 | GO:0005524 | |
Seca10g01446 | 480 | Gene3D | LysM domain | 151 | 212 | IPR036779 | - | |
Seca10g01446 | 480 | Pfam | LysM domain | 160 | 205 | IPR018392 | - | |
Seca10g01446 | 480 | Gene3D | Phosphorylase Kinase; domain 1 | 287 | 380 | - | - | |
Seca10g01446 | 480 | ProSiteProfiles | Protein kinase domain profile. | 309 | 480 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g01446 | 480 | SUPERFAMILY | LysM domain | 158 | 205 | IPR036779 | - | |
Seca10g01446 | 480 | SUPERFAMILY | Protein kinase-like (PK-like) | 293 | 480 | IPR011009 | - | |
Seca10g01446 | 480 | Gene3D | Transferase(Phosphotransferase) domain 1 | 381 | 480 | - | - | |
Seca10g01446 | 480 | FunFam | Kinase family protein | 285 | 380 | - | - | |
Seca10g01446 | 480 | SMART | serkin_6 | 309 | 480 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g01446 | 480 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 428 | 440 | IPR008271 | GO:0004672|GO:0006468 | |
Seca10g01446 | 480 | FunFam | Os07g0541700 protein | 381 | 473 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g01446 | Seca-Chr10 | 15525204 | 15529110 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g01446 | 279 | 480 | Receptor kinase-like Gene Family | AT1G51940 | 59.406 | 3.35e-79 | 257 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Seca10g01446 | Pkinase | 8.4e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g01446 | - | - | gmx:100800907 | 702.205 |