Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01445 ATGAAAATGGCACGGATCATCCTCACCTCCCTTTTACTCTTCCATTTTGTCCTCATTCCTTCCATGGCTTTTCCATCTGCTATTCCTCATGGCATTGGCTTTGGATTTGGATATGGAGGTGGAATTGGGGATGAGAATGACCCACCACTGCCATTTCCACCTGATCAAGAGGAGCAGGTAGACGAACCACAACAGCCTATCAATGTTAATGCCAATCTCAAGGAAGGCTTCTACAGCGACAGTTGCCCAAATGCAGAAAAAATCGTCGCTGATGCACTTGCTGACATTGTTAGGACTAATCCAAACGCTATTGCCAACCTCATTCGCCTTCAATTCCATGACTGCTTCGTTGTTCAGGGATGTGATGCGTCCATCTTGCTAGATTACTCACCAGCTGGTGACAAAGTGGAGAAAAGCTCAATGTTCAACGGTTTACTCCTAAAGGGTGCTGATCTGATTGATGATATCAAGAGAAAGCTTGAGGAAGAATGCCCTGGAGTAGTATCATGTGCTGATACAATGGCATTTGCTACCAATGAGGCCATGTCCTTGGCGGGTTTGAAACGTCAACCACCACTTGGTGGTCGCAGAGATTCACTTTATTCTCTTGCAACTGTTGCAGAAGACAATAACCTTCCTCTGCCTAATTGGAATGCAGATCAGATGATAGAGCTATTCAATAGGAAAGGCTTCACCCCTGAGGAAATGGTGATCCTGCTTGGTGCACATTCAGTTGGTGTAGCTCACTGTGATGTTTTCATGGAGAGGGTATACAACTACAAGAACACTTTTAAACCAGACCCTGCACTTCCCTTACCTGTGGTTGATGAACTCAAACAGATATGTTCTAACCCTGGGACACCCCAGTTTAGAAACCCACCTGTGAACTTTGATGAGACACCAACTGTGCTTGATAACCTGTTTTTCAAGGACATGGTGGAGAAAAGCAAGACATTGCTCATAACAGATGCACATTTGATTGGAGATCCCAGGACTGCCCCTGTTGTCAAACAAATGGCAGATGATGTTGGCTTGTTCCAAAAGAGGTTTGCTGAATTGATGATTAGGTTGAGTGCTATGAATGTGCTGACAGGAAACGATGGAGAGGTGAGGAAGACTTGCAGGTCCACCAATTAA 1137 0.4494 MKMARIILTSLLLFHFVLIPSMAFPSAIPHGIGFGFGYGGGIGDENDPPLPFPPDQEEQVDEPQQPINVNANLKEGFYSDSCPNAEKIVADALADIVRTNPNAIANLIRLQFHDCFVVQGCDASILLDYSPAGDKVEKSSMFNGLLLKGADLIDDIKRKLEEECPGVVSCADTMAFATNEAMSLAGLKRQPPLGGRRDSLYSLATVAEDNNLPLPNWNADQMIELFNRKGFTPEEMVILLGAHSVGVAHCDVFMERVYNYKNTFKPDPALPLPVVDELKQICSNPGTPQFRNPPVNFDETPTVLDNLFFKDMVEKSKTLLITDAHLIGDPRTAPVVKQMADDVGLFQKRFAELMIRLSAMNVLTGNDGEVRKTCRSTN. 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01445 378 Gene3D Peroxidase, domain 2 213 357 - -
Seca10g01445 378 PRINTS Plant peroxidase signature 106 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Plant peroxidase signature 167 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Plant peroxidase signature 82 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Plant peroxidase signature 234 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Plant peroxidase signature 312 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Plant peroxidase signature 352 365 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Plant peroxidase signature 148 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 FunFam Peroxidase 213 357 - -
Seca10g01445 378 CDD secretory_peroxidase 72 377 IPR033905 GO:0004601|GO:0042744
Seca10g01445 378 Gene3D - 76 378 - -
Seca10g01445 378 FunFam Peroxidase 76 226 - -
Seca10g01445 378 SUPERFAMILY Heme-dependent peroxidases 73 378 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 ProSitePatterns Peroxidases proximal heme-ligand signature. 235 245 IPR019793 -
Seca10g01445 378 ProSiteProfiles Plant heme peroxidase family profile. 72 378 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 Pfam Peroxidase 90 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PANTHER PEROXIDASE 25-RELATED 36 366 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Haem peroxidase superfamily signature 297 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01445 378 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01445 Seca-Chr10 15518471 15520712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01445 71 378 Peroxidase AT3G03670 40.323 4.18e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01445 K00430 - gmx:100802856 476.092