Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01434 ATGAACCGCTTCAAGAAGAACCGGAAGAAGCGCGGGCACGTTAGCACAGGGCATGGTCGTATCGGGAAGCACCGGAAGCAAACCGGAGATCGTGGAAATGTTGGTGGCATGCACCACCACCGCATCCTCTTCGATAAGTACCATCCTGGGTACTTTAGGAAAGTGGGTATACTTTATTTCCACAAGTTCCGCAACAAGTTTTACTGTCCCATTGTCAACATCGACAAGCTTTGGTCTTTGGTCCCTCAGGACGTGAAGGACAAGGCCTCCAACTCCAAGGACACTGCCCCATTGGTCGATGTCACCCAACTCGGTTACTTTAAGGTTCTCAGTAAGGGTGTCTTGCCTCCCAATCAGCCCCTTGTTGTTAAGGCCAAGGTATAG 384 0.5078 MNRFKKNRKKRGHVSTGHGRIGKHRKQTGDRGNVGGMHHHRILFDKYHPGYFRKVGILYFHKFRNKFYCPIVNIDKLWSLVPQDVKDKASNSKDTAPLVDVTQLGYFKVLSKGVLPPNQPLVVKAKV. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01434 127 MobiDBLite consensus disorder prediction 1 34 - -
Seca10g01434 127 SUPERFAMILY Ribosomal proteins L15p and L18e 5 126 IPR036227 -
Seca10g01434 127 Gene3D - 57 127 - -
Seca10g01434 127 MobiDBLite consensus disorder prediction 1 25 - -
Seca10g01434 127 PANTHER 60S RIBOSOMAL PROTEIN L27A 2 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01434 Seca-Chr10 15423527 15423910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01434 2 127 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 76.984 2.16e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01434 K02900 - tcc:18603983 229.95