Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01427 ATGGCAGCACGGATAGGCTTGAAGGCGCTACTCCAAAGTCCAAAAGCACCTTCGCATTCTCCTCTTTCCTCTCTCTTCACTCCTTTACCGGGCCCTACTCAACCCGTATCCAAACCCGAAACCAGCATGCTCGGACCCTCTCAACCCGCTCCTAATTCCACTATCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTTCCCCGTTACCCCGACGGCAAGCTTCGCTACCTCGGCGGCCACACCCGCGTCCTCGCCGTTGATCGCTCCGTTCCACTTTCCGAACTGCTGTCGAAGTTGGAAGAGATGTGCGGTTCGTTCGTGAGGCAACTTCGCTGCCAGTTACCGGCCGAAGACCTCGACGCTTTGGTTTCCATCACCTCCGACGAGGATCTCGCCAATCTCATAGAGGAATACGATCGCGTGTCGCCGCCACCACCGTCACTCAAGATCAGAGCCTTTCTTTCGCCGCCGAGATCTTTGAACAAGGTTTCCACGCCTCCGTCCTCGTTTCTGTCAAAATCAGCATCTTCCTCCTCCTCCTCCGCGTCGTCGTCGTCGTCTTCGTCGTCGTATTGTAGCCTTCCCGGCGGAAATTGTGGCCGGAGGTGTGTGGCAGCGCCGATAGTGAACCGCTGCGTCCATCAGATGGCGCCACCGACGGCGTATCCAGTAGGCGTGGAGAAATCTTCTCGGAGGAATATTCCTCTGCCACGTTACGGTTACCATGCTCAGGGGAACACTGGCCATGTTTATCTGATCCACAACGGCAACCACTGGCAATAG 783 0.5632 MAARIGLKALLQSPKAPSHSPLSSLFTPLPGPTQPVSKPETSMLGPSQPAPNSTIKFLCSYGGKILPRYPDGKLRYLGGHTRVLAVDRSVPLSELLSKLEEMCGSFVRQLRCQLPAEDLDALVSITSDEDLANLIEEYDRVSPPPPSLKIRAFLSPPRSLNKVSTPPSSFLSKSASSSSSSASSSSSSSSYCSLPGGNCGRRCVAAPIVNRCVHQMAPPTAYPVGVEKSSRRNIPLPRYGYHAQGNTGHVYLIHNGNHWQ. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01427 260 MobiDBLite consensus disorder prediction 13 49 - -
Seca10g01427 260 SMART PB1_new 69 155 IPR000270 GO:0005515
Seca10g01427 260 MobiDBLite consensus disorder prediction 16 49 - -
Seca10g01427 260 PANTHER OS05G0427100 PROTEIN-RELATED 37 197 - -
Seca10g01427 260 MobiDBLite consensus disorder prediction 158 190 - -
Seca10g01427 260 CDD PB1_UP2 58 154 - -
Seca10g01427 260 Pfam PB1 domain 71 154 IPR000270 GO:0005515
Seca10g01427 260 SUPERFAMILY CAD & PB1 domains 71 162 - -
Seca10g01427 260 Gene3D - 73 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01427 Seca-Chr10 15357974 15361078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01427 55 154 MAP Kinase Kinase Kinase AT5G57610 49.505 3.38e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01427 - - gmx:100815157 281.182