Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g01424 | ATGGAGGAAGCCCTCAGGCGTCTCAACGGTATGGCCCCGATTCCAGAACCCGAACCGCAGGGTCCCGACAACCAGAAGCGGTCTTCCGCCGCCAACAAGAGGACACTGCGAGAAAACAACGGCAGCGGCGGAGGAGGAGGAGTGATGAGGTACCGCGGCGTGAGGCGCAGGCCGTGGGGCCGTTACGCCGCCGAGATAAGAGACCCACAGTCAAAGGAACGGCGCTGGCTGGGCACGTTCGACACGGCGGAGGAAGCCGCCTGCGCCTACGACTGTGCCGCACGTGCGATGCGTGGCTTGAAGGCTCGCACGAACTTCGTGTACCCAACCTCTCCACCTCATCACTCTTCCGCTACTCAACACCCCCTTTTCCCTCCCTTCAACTTCCCCAAGCAACCTTTCAACAAAACCACCACCCCTAACCGCCACGTGTCCACTTGTTGGCCATCTTGCTCTGATCCTCACGCTATTGAGTTCTCACCTGCTTCACCTCACCACCAGCCAAACTCTTCTTCCCTTGACATGCTTCTGTTTCGTGAGTTTCTCAACTCTTCTTCTTCATCATCTAACCCTTCCTTGGTTTCACCCTTTTACGACAACAAGAGCATTTCTTCCTCCTCCTCCTCTTCTTCTTCTCCGTCCATTCCCACCCCTTTTCTTCCAGGTTGCTGTTTGGTGAATTCATGTGGAGGCAGTGCTAATAGCGTCTGTGGCTCTTCTTCCCTAAACATAAACACCAATCCAGCTTTTGTCGCCACCAAAACCACTGAACCTGATGAGGAAGACTCGGAATTCTTTCCAAGAGAGTCTTCTGACTCTGGATTGTTGGAAGAGATAGTCCATAAATTCTTGCCTAAATCAAAGCCCAAAAAATCCCACCAGAGTCCCCCAAAGGCAGAGACTTTCTACAACCCTGAATCATTTCCTCCACCTGCACCTCATCAAATGCTCTTTTCCACCCCTCAATGTCACAACCAGACGAAAAGGGGGATTCCCAAGAACGAGGGTTTTGGCGTCTCTTTTGATCACCACCACCAAAGTTTCACCATGCAGCAATTGGACGCTTTTAATAGCGTGCAGCAGGGTATGCCTCTGGGGAATGAACAACTCATGATGAATCATGCGGAGAATTACTCTATCTTACAAGATATTTTTCAATACCCAGACCTTATCAACACTTTTGCACTCAGGATGCAAAATGCTTAG | 1206 | 0.5141 | MEEALRRLNGMAPIPEPEPQGPDNQKRSSAANKRTLRENNGSGGGGGVMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPHHSSATQHPLFPPFNFPKQPFNKTTTPNRHVSTCWPSCSDPHAIEFSPASPHHQPNSSSLDMLLFREFLNSSSSSSNPSLVSPFYDNKSISSSSSSSSSPSIPTPFLPGCCLVNSCGGSANSVCGSSSLNINTNPAFVATKTTEPDEEDSEFFPRESSDSGLLEEIVHKFLPKSKPKKSHQSPPKAETFYNPESFPPPAPHQMLFSTPQCHNQTKRGIPKNEGFGVSFDHHHQSFTMQQLDAFNSVQQGMPLGNEQLMMNHAENYSILQDIFQYPDLINTFALRMQNA. | 402 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g01424 | 401 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 30 | 251 | - | - | |
Seca10g01424 | 401 | PRINTS | Ethylene responsive element binding protein signature | 73 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01424 | 401 | PRINTS | Ethylene responsive element binding protein signature | 51 | 62 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01424 | 401 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Seca10g01424 | 401 | ProSiteProfiles | AP2/ERF domain profile. | 50 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01424 | 401 | Gene3D | AP2/ERF domain | 49 | 108 | IPR036955 | GO:0003700|GO:0006355 | |
Seca10g01424 | 401 | MobiDBLite | consensus disorder prediction | 22 | 39 | - | - | |
Seca10g01424 | 401 | MobiDBLite | consensus disorder prediction | 111 | 140 | - | - | |
Seca10g01424 | 401 | SMART | rav1_2 | 50 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01424 | 401 | SUPERFAMILY | DNA-binding domain | 50 | 107 | IPR016177 | GO:0003677 | |
Seca10g01424 | 401 | FunFam | Ethylene-responsive transcription factor 2 | 49 | 108 | - | - | |
Seca10g01424 | 401 | CDD | AP2 | 50 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Seca10g01424 | 401 | Pfam | AP2 domain | 50 | 99 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g01424 | Seca-Chr10 | 15330299 | 15331504 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g01424 | 48 | 299 | AP2-EREBP Transcription Factor Family | AT1G24590 | 41.473 | 9.77e-41 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Seca10g01424 | AP2 | 3e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g01424 | - | - | vum:124821082 | 331.257 |