Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01414 ATGAAATGGGCAATGCGACTCAGAGTTGTTCTACATCTTGCAGAAGCTCTAGAATACTTCACAAGCAAAAGGTGTGCCCTCTATCATGACCTTAATGCATATAGAGTTTTATTTGATGAGGATGGTAATCCTAGGCTTTCAAGGTTTGGTCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCGTTTACCCCTCCAGAATATCTCAGAACTGGTTTGCCATTTTTCTTTGATGTTATGGCTTTATTTTAA 264 0.3788 MKWAMRLRVVLHLAEALEYFTSKRCALYHDLNAYRVLFDEDGNPRLSRFGLMKNSRDGKSYSTNLAFTPPEYLRTGLPFFFDVMALF. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01414 87 SUPERFAMILY Protein kinase-like (PK-like) 2 76 IPR011009 -
Seca10g01414 87 Gene3D Transferase(Phosphotransferase) domain 1 1 80 - -
Seca10g01414 87 Pfam Protein tyrosine and serine/threonine kinase 4 72 IPR001245 GO:0004672|GO:0006468
Seca10g01414 87 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 76 IPR045845 GO:0004672|GO:0009742
Seca10g01414 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01414 Seca-Chr10 14697737 14698077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01414 1 76 Receptor kinase-like Gene Family AT1G11050 33.735 5.28e-08 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Seca10g01414 PK_Tyr_Ser-Thr 2.9e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01414 K14500 - gmx:100781311 145.976