Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01413 ATGAAGGCACTCAATGACATAACTTTTGAGAATGGTATTGTGCTGCAGCTTGAGGAAGCTTCTTCTGTTTTGGTTGAGGAGGAAGCTAGATCCGTTGGTCAGCTTCATAACCAAAGATTGGCAAATTTGCTTGGTTGTTGTTATGAAGGCAATGAGAGATTGCTTGTGGCCGAATATATGCCCAATGAAACACTAGCAAAACACCTTTTTCCATTGTAA 219 0.4064 MKALNDITFENGIVLQLEEASSVLVEEEARSVGQLHNQRLANLLGCCYEGNERLLVAEYMPNETLAKHLFPL. 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01413 72 Gene3D Phosphorylase Kinase; domain 1 14 59 - -
Seca10g01413 72 SUPERFAMILY Protein kinase-like (PK-like) 23 70 IPR011009 -
Seca10g01413 72 Pfam Protein tyrosine and serine/threonine kinase 23 69 IPR001245 GO:0004672|GO:0006468
Seca10g01413 72 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 27 70 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01413 Seca-Chr10 14693545 14697176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01413 7 70 Receptor kinase-like Gene Family AT4G05200 38.806 3.31e-08 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Seca10g01413 PK_Tyr_Ser-Thr 3.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01413 K14500 - zof:122002777 88.1965