Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01406 ATGGCTGAGAGCTTCGACAGTGCCACCTCTAACCTTCTATGTTCCGAGAACAGTAGTACCTGCTTTGATGATGATTTGGAATGTAATGGTTTAGATGGGTCTGGAACCTCTCCTTCCTGGGACCACACAAACCTTAACTCTGATCAGTGTCCGAGTTTGGGCAGCCATGGATCGGAGTCCTTTACGTGTTTTATGGTACAAAGTGAGGAAACTGTGAGGGCTATGGTTAAGAGGGAGAGGGAGCATTTGCCAAGGGATGATTACCTCAAGAGGCTGCGTAGTGGGGACTTGGACTTGAGTGTTAGGAGGGAGGCTCTTGATTGGATTTGGAAGGCACATGCTTATTTTGGTTTTGGACCATTGAGCTTTTGTCTATCTGTGAACTACTTGGATCGCTTCCTATCGGTTTTTGAATTACCTAGAGGTGTAAGTTGGACTGTGCAATTATTAGCTGTAGCTTGCTTGTCAATTGCTGCTAAAATGGAAGAGATTAAAGTGCCTCAATCTGTAGATTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAGAAAATGGAACTATTAGTATTGAGCACATTGAGATGGAAAATGCAAGCTTTAACGCCTTGTTCCTTCATAGACTACTTCCTTGGTAAGATCACTTGTGAGAAACATCCAGTAAAGTCATCCATTTCAAGATCAGTGCAACTCATCCTTAGCATAATCAAGGGTATTCTCATTATTCATTACTCTGTTTGA 750 0.4213 MAESFDSATSNLLCSENSSTCFDDDLECNGLDGSGTSPSWDHTNLNSDQCPSLGSHGSESFTCFMVQSEETVRAMVKREREHLPRDDYLKRLRSGDLDLSVRREALDWIWKAHAYFGFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGEPKFVFEAKTIQKMELLVLSTLRWKMQALTPCSFIDYFLGKITCEKHPVKSSISRSVQLILSIIKGILIIHYSV. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01406 249 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Seca10g01406 249 SMART cyclin_7 107 195 IPR013763 -
Seca10g01406 249 SUPERFAMILY Cyclin-like 61 201 IPR036915 -
Seca10g01406 249 Gene3D - 85 202 - -
Seca10g01406 249 Gene3D - 74 237 - -
Seca10g01406 249 Pfam Cyclin, N-terminal domain 73 201 IPR006671 -
Seca10g01406 249 PANTHER CYCLINS 68 217 IPR039361 -
Seca10g01406 249 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Seca10g01406 249 FunFam D2/4-type cyclin 85 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01406 Seca-Chr10 14594756 14597298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01406 67 247 Core Cell Cycle Gene Families AT5G65420 60.656 8.72e-80 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01406 K18810 - gmx:100794010 366.696