Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01375 ATGGATCTGATCCAATCGAACGATTTTCAGAAACATCCACAAACCCTAATCTCAGAAAATAAAGACTCTGTAATGGAAGATGCCGACGAGTCCTTGTTCGATTCGATGGTTTGTGATTCTATTTCAAGACTCATTCCAACTGGGTTTACGATATCTGACAACGCAGAGGAGGAGTATTTCATGTTTGTGAATGCGGGAGGGGATGCCTTTAATGAAGCATCGGGTGGAATAAAGTTCCTGGGTGACACCTTTTTTGATGGTGGCAACGTTATGCGTACTAATGAGCAAATAGTGGATGGTGGAGATTACCCATTTATCTATCAATCAGCTCGGTTGGGAAGTTTTTGTTATAGATTTGATAATCTTCCACCTGGAGACTATGTTGTTGATCTTCATTTTGTGGAGATCATTAACACAAATGGGCCGAAAGGAATGAGGGTTTTCAATGTATACATCCAAGAAGAAAAGGTTCTATCTGAATTGGATATCTATGCAGTTGTTGGAGCTAACAAGCCATTGCAGTTGATTGATTCAAGGGTGTCTGTGAAGGATGATGGGGTGATTCTCATAAGATTTGAAAGTATAAACGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGGAGAGCAACAAAGACTTCAGTTCCACCAATGACAAGTGACTGCATTAAATGTAACTACTGTGCTGCGCAGATTGAAATTCCTTCATCACAGATGAAAGTTATGCAGACAAAATCTACTGCAAAGTATGTGAATAAGATAAAGGAGCTCACAATGCAGTGCGAGCTCAAGTCAAAAGAATGCTATGAGGCTTGGATGTCATTAACTGCAACGAATGAGCAATTGGAAAAAGTCCAGATGGAACTTGACAACGTGACATTTAAGTCACTCACTACTGATCAAACTATGGAGAAGCAAGCTGAGAGCCTGAGGAATATTTCTAACAGGTACGAGCTTGATAAGAAGAAATGGACAGAAGCAATCAACAATTTACAGGAAAAAGTAAAGTCGATGAAGAGCGACTATTCTCAACTTTCCTTTGAAGCACATGAATGTGTTGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTAGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGATGATACAGAGGAAGAGGCTCTTTAATGAAGTTCAAGAGGCCAAAGGGAACATTAGGGTTTTCTGCCGCTGTCGTCCATTGAATAAGGCTGAAATGTCAGCTGGATGTACAACAGTTGTGGATTTTGATGCAGCAAAGGATGGAACCCTTGGAATTTTGACAAGTGGCTCCACCAAAAAGTCATTCAGATTTGACAGAGTTTATACACCGAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAGTCTCTGTGCTGGATGGATACAACGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGAAAGACATTCACCATGGAAGGAACAGAGCAGAATAGAGGAGTTAATTACAGGACTCTTGAGCACTTGTTTAAAATTAGTAAGGAAAGGAGTGAAACATTTTCATATGACATATCTGTTAGTGTGCTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGACCGACATCAAAAAGGTTGGAGATAAAACAAGACTCTGGAGGATTTCATCATGTTCCTGGTGTTGTAGAAGCCAAGGTTGATAACATTTATGATGTATGGAATGTACTGCAGACTGGAAGTAATGCTAGAGCAGTTGGGAGTAATAATGTTAATGAGCATAGCAGTCGATCTCACTGCATGCTTTGTATAATGGTAAGGGCTAAAAATTTGTTGAATGGTGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGAAGTGCAAGGGGAGCGACTTAAGGAGGCACAAAACATCAATCGATCTCTTTCTGCTCTTGGAGATGTTATATCCGCTCTAGCAGCCAAAAGTAGTCACATTCCATATAGGAATTCTAAATTGACACATTTACTTCAAGACTCACTAGGAGGTGACTCTAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGACTTAGGTGAAACTCTAAGCTCACTTAATTTTGCAACTAGAGTGAGGGGCGTTGAGCTTGGTCCTGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAGACCAAAGCAATGCTTGAAAAAGCACGAAGTGAATGCAGAAGTAAAGATGAATCTATGCGGAAACTAGAAGAAAATTTGCAAAGCATGGAGAGTAAGGCCAAAGGCAAGGATAATATTCACAGAACTCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGTTGAAAACAGCCTTGCAAAACCAATCAGAGAAGCAAATTTCTCAATTATCTGAAAAATTGAAAGGAAAAGAGGAAACCTGCTGCACTCTCCAACATAAGGTCAAAGAGCTAGAGAAAAAACTGAAGGAACAACTGCAGTCAGAGACAGCAAGTTTTCAACAGCAGGTTTGTCTGTTACTTTGGGGAAATCCTTCTCTAATTCTTTTTTCCTGGCAAAATCTTAACATGAACATGCATGATCAAAAGAAAATTTTAAGTCACTTCTTCTACCTTAAAAGCAGGTTTGGGATCTAG 2670 0.394 MDLIQSNDFQKHPQTLISENKDSVMEDADESLFDSMVCDSISRLIPTGFTISDNAEEEYFMFVNAGGDAFNEASGGIKFLGDTFFDGGNVMRTNEQIVDGGDYPFIYQSARLGSFCYRFDNLPPGDYVVDLHFVEIINTNGPKGMRVFNVYIQEEKVLSELDIYAVVGANKPLQLIDSRVSVKDDGVILIRFESINGSPVVSGICIRRATKTSVPPMTSDCIKCNYCAAQIEIPSSQMKVMQTKSTAKYVNKIKELTMQCELKSKECYEAWMSLTATNEQLEKVQMELDNVTFKSLTTDQTMEKQAESLRNISNRYELDKKKWTEAINNLQEKVKSMKSDYSQLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYNEEMIQRKRLFNEVQEAKGNIRVFCRCRPLNKAEMSAGCTTVVDFDAAKDGTLGILTSGSTKKSFRFDRVYTPKDDQVDVFADASSMVVSVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKISKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQDSGGFHHVPGVVEAKVDNIYDVWNVLQTGSNARAVGSNNVNEHSSRSHCMLCIMVRAKNLLNGECTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDLGETLSSLNFATRVRGVELGPVKKQIDTSELQKTKAMLEKARSECRSKDESMRKLEENLQSMESKAKGKDNIHRTLQEKIKELEGQIELKTALQNQSEKQISQLSEKLKGKEETCCTLQHKVKELEKKLKEQLQSETASFQQQVCLLLWGNPSLILFSWQNLNMNMHDQKKILSHFFYLKSRFGI. 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01375 889 Coils Coil 313 347 - -
Seca10g01375 889 Pfam Malectin domain 61 204 IPR021720 -
Seca10g01375 889 Gene3D - 55 211 - -
Seca10g01375 889 FunFam kinesin-like protein KIN-14R 348 723 - -
Seca10g01375 889 PANTHER KINESIN-LIKE PROTEIN KLP-3 67 830 IPR027640 GO:0003777|GO:0007018
Seca10g01375 889 SMART kinesin_4 397 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01375 889 Pfam Kinesin motor domain 405 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01375 889 ProSiteProfiles Kinesin motor domain profile. 399 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01375 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 757 IPR027417 -
Seca10g01375 889 Coils Coil 742 818 - -
Seca10g01375 889 Coils Coil 365 385 - -
Seca10g01375 889 FunFam Kinesin-like protein KIN-14R 55 210 - -
Seca10g01375 889 Gene3D Kinesin motor domain 341 723 IPR036961 -
Seca10g01375 889 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01375 889 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01375 889 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01375 889 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01375 889 CDD KISc_C_terminal 397 723 - -
Seca10g01375 889 ProSitePatterns Kinesin motor domain signature. 621 632 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01375 Seca-Chr10 14132956 14138104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01375 371 774 Calmodulin-binding Proteins AT5G65930 42.579 2.01e-89 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01375 K10406 - gmx:100800016 1473.76