Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01372 ATGGCAAACAATATTTTCTCAGACAAAAAGGAAGTACCTGCTTATGGGTGGGCTGCTAGAGACTCCTCAGGAATTCTCTCCCCTTTCCATTTCTCCATAAGGGCAAATGGAGATGGCGATATCACCATCAAGATACTCTATTGCGGGATTTGCCACGCTGACGTTCATGGTGTCAAGGATGAGTTGGGCCACAGCATCTATCCCATGGTTCCCGGACACGAAATTGTGGGTGAAGTGATAAAGGTGGGTCGCAGTGTGACAAAGTTCAGAATTGGCGACAGAGCCGGTGTTGGTCCAATTTTTGGTTCCTGTCGTTCATATTCTAACACTAAGCCAATTTTAGCCTACGGCGGATACTCAGATAAGATAGTGGTTGACGAGCATTTTACTGTCATAATGCCCAAAGGGTTACCACTAGAAGGTGCAGCGCCACTGCTATGTGCTGGACTCACAGTGTACAGCCCCATGATGCACCACGGACTGTGTCAACCTGGCCAGCATTTGGGTGTGGTGGGTCTAGGTGGTCTTGGTCATGTGGCTGTCAAATTTGCTAAGGCTTTCAATATGAAAGTCACAGTGATAAGTACTTCCCCTGGCAAGAAGAAGGAAGCATTGGAAAGGCTTGGTGCTGACTGCTTCTTGCTCATAAATGATCAACAACAATTGCTGGTAATTAAAAAAAGAACCAATTAA 693 0.4618 MANNIFSDKKEVPAYGWAARDSSGILSPFHFSIRANGDGDITIKILYCGICHADVHGVKDELGHSIYPMVPGHEIVGEVIKVGRSVTKFRIGDRAGVGPIFGSCRSYSNTKPILAYGGYSDKIVVDEHFTVIMPKGLPLEGAAPLLCAGLTVYSPMMHHGLCQPGQHLGVVGLGGLGHVAVKFAKAFNMKVTVISTSPGKKKEALERLGADCFLLINDQQQLLVIKKRTN. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01372 230 Pfam Alcohol dehydrogenase GroES-like domain 39 105 IPR013154 -
Seca10g01372 230 Gene3D - 148 222 - -
Seca10g01372 230 SUPERFAMILY GroES-like 21 166 IPR011032 -
Seca10g01372 230 Gene3D - 17 107 - -
Seca10g01372 230 SMART PKS_ER_names_mod 24 225 IPR020843 GO:0016491
Seca10g01372 230 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Seca10g01372 230 Gene3D - 114 147 - -
Seca10g01372 230 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 137 222 IPR036291 -
Seca10g01372 230 PANTHER ALDEHYDE REDUCTASE 11 222 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01372 Seca-Chr10 14097795 14103949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01372 15 222 Monolignol Biosynthesis Gene Families AT4G39330 54.825 1.44e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01372 - - qlo:115967174 315.849