Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01370 ATGAAATTTGAGTCAAGGGAAAATGCTCATTTATTTTACATTCGTTATGCTAAATATGTTGGATTTGGTGTATCAACTAAAACTAGTCACCGTTCAAAAATTTCTAGGGAGTTTATTGATGTAATATATGCTTACACAAGACATGGGAGAAAACGAGAATCATCTGCACTTAATCCACGTCCTTGTGTCAAGGTGGAATGTGAGGCTAGCTTACGTATTAAAAGAAATTGTGATGGAAAATGGGTTGTTCATAGCTTCATCAAAGATCACAATCATGAGCCAAAACAGATATCAGGAGTCCACTGCTTATAG 312 0.3558 MKFESRENAHLFYIRYAKYVGFGVSTKTSHRSKISREFIDVIYAYTRHGRKRESSALNPRPCVKVECEASLRIKRNCDGKWVVHSFIKDHNHEPKQISGVHCL. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01370 103 Pfam FAR1 DNA-binding domain 12 93 IPR004330 -
Seca10g01370 103 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01370 Seca-Chr10 14063497 14063808 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g01370 FAR1 7.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01370 - - mtr:112418473 154.451