Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01367 ATGGCAACAATAACAGAACATGAAGTTGAGCATCCAAAGAAGGCCTTCGGATGGGCAGCAAGAGATACTTCTGGTTTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACGGGTGAGAAGGATGTGGCATTCAAAGTGTTGTACTGTGGGGTATGCCACTCAGATCTCCACATGTTGAAGAATGAATGGGGCACTTCCACCTATCCACTAGTCCCCGGGCATGAGATTGTTGGAGTAGTGACAGAGGTGGGAAGCAAAGTACACAAGTTCAAAGTCGGGGACAGAGTAGGTGTGGGATGCTTGGTTGATTCTTGCCGCTCATGTCAAAATTGTGTTGACAATCTTGAGAATTACTGCCCACAATATACGCTGACTTATGGTGCCAAATACATTGATGGAACCACCACATATGGAGGTTACTCTGACTTTATGGTAACAGACGAGCACTTTGTGGTTGGCATTCCTGATAGCATACCTCTTGATGCTGCTGCACCTCTCCTCTGTGCTGGAATCACAGTGTATAGCCCTTTGAGATATTTTGGACTTGACAAGCCTGGTCTCCATGTGGGTGTGGTTGGTCTCGGTGGATTAGGCCATATGGCTGTTAAATTTGCCAAAGCTTTTGGGGCTAATGTCACTGTTATCAGTACATCACCCAACAAACAAAAGGAAGCAATACAACACCTTGGAGCTGACTCGTTTCTAATAAGCCGTGACCAAAATCAGATGCAGGCTGCAATGGGCACTCTGGATGGAATTATTGACACAGTTTCTGCTGATCATCCTCTGTTACCTCTGATTGGTTTATTGAAGTCTCATGGGAAGCTTGTAATGGTGGGAGCACCAGAAAAGCCTCTGGAGTTGCCGGTTTTTCCTTTACTATTGGGAAGAAAGATAGTAGCTGGTAGTGGAATTGGAGGGATGAAGGAGACACAAGAGATGATTGACTTTGCAGCAAAACATAATGTAAAACCTGACATTGAAGTCATTCCTATTGATTATGTCAATACAGCAATGGAGCGTCTCCTTAAAGCGGATGTCAAATATCGATTTGTGATTGACATTGGAAACACACTGAAACCAAGCTCTTAG 1092 0.4451 MATITEHEVEHPKKAFGWAARDTSGFLSPFNFSRRETGEKDVAFKVLYCGVCHSDLHMLKNEWGTSTYPLVPGHEIVGVVTEVGSKVHKFKVGDRVGVGCLVDSCRSCQNCVDNLENYCPQYTLTYGAKYIDGTTTYGGYSDFMVTDEHFVVGIPDSIPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKQKEAIQHLGADSFLISRDQNQMQAAMGTLDGIIDTVSADHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLLGRKIVAGSGIGGMKETQEMIDFAAKHNVKPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01367 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Seca10g01367 363 Gene3D - 18 355 - -
Seca10g01367 363 PANTHER ALDEHYDE REDUCTASE 7 358 IPR047109 GO:0016616
Seca10g01367 363 Gene3D - 169 325 - -
Seca10g01367 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Seca10g01367 363 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Seca10g01367 363 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Seca10g01367 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 324 IPR036291 -
Seca10g01367 363 CDD CAD1 16 354 IPR047109 GO:0016616
Seca10g01367 363 Pfam Alcohol dehydrogenase GroES-like domain 40 152 IPR013154 -
Seca10g01367 363 FunFam Uncharacterized protein 18 168 - -
Seca10g01367 363 SUPERFAMILY GroES-like 23 186 IPR011032 -
Seca10g01367 363 SMART PKS_ER_names_mod 19 353 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01367 Seca-Chr10 14038161 14040269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01367 13 362 Monolignol Biosynthesis Gene Families AT4G37990 73.714 1.41e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01367 K23232 - gmx:100816901 634.024