Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01364 ATGTCTCTTGAATTTGATTTAGAGGAAGATGCTTTTAATTTTGATAGTAATTATGCTAAAGTAGTTGGGTTTTCAGTAAGAAAAGATGACGTCTATCATGATGATTGGTATGGGATTGTTATGAGAAACATGGTATGTAATAGGCAAGGAGAGAGGTCTGAGAAGAACATGCAAAGGAAGGACAGGTGTCGTGAACCAAAGGCCATTACCCGCACACGTTGCCAAGCAAGGCTCCGTGTTCGTTTAGGTTACTTGAGTGGAAAATGGACAGTTACTCATTTTGAGCCCAATCATAATCACGAGTTGACCCCATCAACATATGTCCATTTGATTTCTGCATATAGAGGTCTTTCTGAGGGTGATAAGGCTCAAGTGAATAGTTTGCACATGTATGGTGTTCGTACTTGTCATATTTTGGGTTTCATATTAGGTCAGAAAGGGGGTATGCAGATCTAG 456 0.3991 MSLEFDLEEDAFNFDSNYAKVVGFSVRKDDVYHDDWYGIVMRNMVCNRQGERSEKNMQRKDRCREPKAITRTRCQARLRVRLGYLSGKWTVTHFEPNHNHELTPSTYVHLISAYRGLSEGDKAQVNSLHMYGVRTCHILGFILGQKGGMQI. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01364 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 147 - -
Seca10g01364 151 Pfam FAR1 DNA-binding domain 14 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01364 Seca-Chr10 13979468 13979923 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g01364 FAR1 5.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01364 - - ccaj:109792835 171.785