Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01362 ATGAAATCAGTGATCGAGAGATATAAGACGTGCAAGGAGGAACATCAACAACTAATAAATCCAGAATCTGAAGTCAAGTTTTGGCAAAAGGAGGCAGAAATTTTAAGGCAGCAATTACAGAATCTACAAGAAAACCATAGGCAAATGATGGGAGAACAGCTTTACGGTTTGAGTGTGAAAAACCTGCAAGATCTAGAGAATCAACTCGAAATGAGTCTCCAAGGTGTCCGCATGAAAAAGGAAAAAATTCTAACAGATGAAATCCAAGAGCTGAACCGAAAGGGAAACATCATCCATCAGGAAAACGTGGAACTTTGTAAGAAGGTAAACCTCATTCAACAAGAAAACACACAGCTATGTGAAAAGGTCTATGGCACAGCAGATATGGCCGCAACAAGCAGGAACACATTTGTTCCAATTCCATATGGTATTCATGCAGGAGGGTATCCACAAGCATTGGTCCAACTTCAGCTATGCCAACCTGAGCAAGAACCCTGTGAAACATCTGGAAGTGCCACGAAATGA 525 0.4114 MKSVIERYKTCKEEHQQLINPESEVKFWQKEAEILRQQLQNLQENHRQMMGEQLYGLSVKNLQDLENQLEMSLQGVRMKKEKILTDEIQELNRKGNIIHQENVELCKKVNLIQQENTQLCEKVYGTADMAATSRNTFVPIPYGIHAGGYPQALVQLQLCQPEQEPCETSGSATK. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01362 174 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca10g01362 174 Coils Coil 25 52 - -
Seca10g01362 174 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01362 Seca-Chr10 13914516 13920000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01362 1 172 MADS-box Gene Family AT2G22630 54.070 2.24e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01362 K09264 - gmx:100795778 259.225