Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01344 ATGTCAGTAAACGCTCTGCTAGGCCTTCGCATGGTTGCTCCATTGTTCTTGTCCTGGAGTCATCTCACTGATAATACAATTCAACAAAATGATTATGAGTATAATCCCTATGCAAAGGAATTTGGTATCAGCATTGACAACAAGTTTGCATCAGTTGAGACTCGGGTTCTTCCATCTCCATGGTTGAAATATCACGACACTGAAAGAGAGAAAGAATACTTGCCACAAATTGGTCAATGGAACATGATGAACAAGAAAGTTATAAACGGAAGCACAATGAGGTATTGGGCATGTATCAATTTCTCTAGAAGTGTCCAAGAAAGTACAGCTCGTGGATTTTGTCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGTAAAGTTTCAAATTTTGGTCATACCTTCAAGACCGGATATGGTAAAGAAGTCCATGAAATATGTACATTCTGCTTTTCTAGACAAACTTGGTGGAAAAGAGGTAGAGTTGCTAATTGTCATTCTTCCAGACAATAATGGTTCTCTGTATGTGGAGGATAACTCCATATTTCACGCTTGCACTGAAGAAACAAAATCTTCCTTCAGGCGATCTCAAAAGAATCTGCGAAACAGATCTGGGATTGATTTCCCAATGTTGTCTTATAAAACACGTATTCAAGATTAA 663 0.3846 MSVNALLGLRMVAPLFLSWSHLTDNTIQQNDYEYNPYAKEFGISIDNKFASVETRVLPSPWLKYHDTEREKEYLPQIGQWNMMNKKVINGSTMRYWACINFSRSVQESTARGFCQQLVQMCQISGMVKFQILVIPSRPDMVKKSMKYVHSAFLDKLGGKEVELLIVILPDNNGSLYVEDNSIFHACTEETKSSFRRSQKNLRNRSGIDFPMLSYKTRIQD. 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01344 220 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 26 176 - -
Seca10g01344 220 SUPERFAMILY Ribonuclease H-like 52 176 IPR012337 -
Seca10g01344 220 Pfam Mid domain of argonaute 75 126 IPR032473 -
Seca10g01344 220 Gene3D - 56 196 - -
Seca10g01344 220 Pfam Argonaute linker 2 domain 26 64 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01344 Seca-Chr10 13700635 13703386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01344 26 205 Eukaryotic Initiation Factors Gene Family AT5G43810 54.450 2.99e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01344 K11593 - gmx:100798086 265.003