Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01335 ATGGGAGATGTGGCTAAGGACCTTACAGCTGGGACTGTTGGAGGGGCAGCACAATTGATAGTTGGACACCCATTTGACACCATCAAGGTCAAACTCCAAAGCCAGCCTACACCACTTCCTGGTCAGCTTCCCAATTATTCTGGTGCAATTGATGCTGTCAAGAAGACAATAGCAGCTGAAGGCCCAAGGGGTTTATACAAAGGTATGGGAGCCCCACTTGCTACAGTAGCTGCCTTCAATGCTGTCCTGTTTACAGTAAGGGGGCAAATGGAGGGATTATTGAGGTCCCATCCTGGTGCCTCCCTCACAGTACAGCAGCAGATTGTTTGTGGAGCTGGAGCTGGACTTGCTGTTTCCTTCCTAGCTTGTCCAACTGAACTGATCAAATGCAGGATGAATATCAGGTTGCAAGCACAAAGTGCACTAGCTGGTTCTGGAGGAGCTGCAGTGGCAGTGAAATATGGGGGACCCATGGATGTGGCCAGGCACGTTCTCAGGTCAGAAGGGGGAACGATAGGTCTTTTCAAAGGCTTGGTTCCTACTATGGCACGTGAAGTACCTGGGAATGCTGCAATGTTTGGTGTATATGAAGCATTCAAGCAATTACTTGCAGGAGGCACAGATACCTCTGGACTAGGTAGAGGTTCTCTGATGTTTGCTGGAGGCATGGCTGGAGCTGCCTTCTGGTTAATGGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAAAAATCCAAAGTTTTCTGGTTCAATTGATGCTTTCAAAAGGATTCTAGCTTCTGAGGGGACCAAGGGCCTTTATAAGGGTTTTGGTCCTGCAATGGCCCGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCTTATGAGATGACAAGATCAGCTCTTGGATGA 906 0.4779 MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQLPNYSGAIDAVKKTIAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSHPGASLTVQQQIVCGAGAGLAVSFLACPTELIKCRMNIRLQAQSALAGSGGAAVAVKYGGPMDVARHVLRSEGGTIGLFKGLVPTMAREVPGNAAMFGVYEAFKQLLAGGTDTSGLGRGSLMFAGGMAGAAFWLMVYPTDVIKSVIQVDDYKNPKFSGSIDAFKRILASEGTKGLYKGFGPAMARSVPANAACFLAYEMTRSALG. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01335 301 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 300 - -
Seca10g01335 301 SUPERFAMILY Mitochondrial carrier 3 294 IPR023395 -
Seca10g01335 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 299 IPR018108 -
Seca10g01335 301 Pfam Mitochondrial carrier protein 102 204 IPR018108 -
Seca10g01335 301 Pfam Mitochondrial carrier protein 218 300 IPR018108 -
Seca10g01335 301 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Seca10g01335 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Seca10g01335 301 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 300 - -
Seca10g01335 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 202 IPR018108 -
Seca10g01335 301 Gene3D Mitochondrial carrier domain 2 300 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01335 Seca-Chr10 13552695 13554271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01335 22 300 Antiporters AT1G79900 31.579 2.42e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01335 K15109 - gmx:100781634 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01335 10 13552695 13554271 Seca10g01335 10 13552695 13554271 ECH