Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01328 ATGCTTCCACAAGTGAAACCTTCACATCTTCGTCGTGAGTTGCTGTCAACGCAGCTTCCATCTTGTCGTCTCGCTACCTTTGAGCTTCTAGAGTCGCGTCTTCTTTGCTTTACAGATCTAGTGGCTATAATCCCTAGCTATAATTTTCAGTTTGGAACAGATCTAAGATTTTCAGACTTCATTCTCATCCCTAGCTATAATCCCAAGGGTAAGGATGTTGAGCTTAACTTCCCTGACTCAGCTTCTTCATTGCCTGTCCTTGCTTCTTTGTCTGCCCGTGATATTCAGGTGGCTGCAACTAGTGCTGCTACTGGGGCAGCAAAGGATGCTTTGTCTGCTGGTGGTAGTAGTAGTGGTGTTGAGGGAATTATGAATAATTATTTTTCATCACAAGAACAGGTGGAAGGAGTTAATCATAACCAATTTGTGGATGAGGATTTGATCTTTGATATGCCTAATGTTCTGGTTAATATGGCACAGGGAATGCTGCTTAGTCCTCCTCCTTTTGACATTGGTGGGGAGGCTGATGACAACATGGATCAAGAGCCAAGCCTGTGGAATTTCCCTTAA 570 0.4368 MLPQVKPSHLRRELLSTQLPSCRLATFELLESRLLCFTDLVAIIPSYNFQFGTDLRFSDFILIPSYNPKGKDVELNFPDSASSLPVLASLSARDIQVAATSAATGAAKDALSAGGSSSGVEGIMNNYFSSQEQVEGVNHNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGGEADDNMDQEPSLWNFP. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01328 189 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 69 187 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01328 Seca-Chr10 13435605 13437085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01328 69 189 AP2-EREBP Transcription Factor Family AT2G36450 45.736 3.60e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01328 - - pvu:PHAVU_007G222600g 134.42