Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01318 ATGGCAATCGAAAACCATGACACCACTGTCCGGGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGCCCTGATGATGATGACAACAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGTAAGTTACATGCTGATTCTCACAAGAGTGAATGCAACATGTATTGCTTGGACTGTATGAATGGAGCGCTCTGCTCTCTCTGCCTCGCCTACCACAAGGATCATCGTGCTATTCAGATTAGGAGGTCCTCATACCATGACGTGATCAGGGTCTCTGAGATTCAGAAGGTGTTGGACATCACTGGCGTCCAAACCTACATTATCAACAGCGCAAGAGTGGTGTTCTTGAACGAGAGGCCTCAGCCAAGGCCTGGGAAAGGTGTCACAAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTCGATTCTTACCGGTTCTGTTCTCTGGGTTGCAAGGTATTTTACTTTTACAAGCAATGTCTTTTTATTCATTGTTTAAGCTTCTGA 528 0.4697 MAIENHDTTVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKVFYFYKQCLFIHCLSF. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01318 175 Pfam PLATZ transcription factor 89 160 IPR006734 -
Seca10g01318 175 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 28 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01318 Seca-Chr10 13239878 13241954 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca10g01318 PLATZ 3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01318 - - gmx:100791221 330.872