Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01308 GGGCTTACTCCGGATTCCACGCAGTGCCTCTATTACGGGTTGTTCAGGGACGCAAGGGTCAATGAAGACCTGGAATTGAGTACTGCTCTTTTGAGTCTCACACGTGACACTGAGGGAAAGGAGAGCATCTTGCACGTGCTGGACCGCATCATCTCTGAATGGACAGAGAGAAGCCAGGTGGTTGCCGATTGCGCGAAGCGGTGGTTCCTGGAGACGCTCAAGGAGGCTAAGGCTGGGGACATTTCCATGCAGATGCATGAACTATTTAGAATTGGAAAGGGAGAGCGACCTCCTATTCCTGACTCTCTTTTAAGAGATGCAAAGGATTTTATCCTGCAGTGCCTTCAAGTCAATCCGGGTGATCGTCCCACTGCTGGTCAACTCTTAAACCATCCATTTGTCCAAAGGCCAGTTTCCCAGTCCTCTGGTTCCTCATTTCCTTATATTTATGGCAGAAAGAGTTAA 465 0.4946 GLTPDSTQCLYYGLFRDARVNEDLELSTALLSLTRDTEGKESILHVLDRIISEWTERSQVVADCAKRWFLETLKEAKAGDISMQMHELFRIGKGERPPIPDSLLRDAKDFILQCLQVNPGDRPTAGQLLNHPFVQRPVSQSSGSSFPYIYGRKS. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01308 154 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 88 142 - -
Seca10g01308 154 SUPERFAMILY Protein kinase-like (PK-like) 82 138 IPR011009 -
Seca10g01308 154 Gene3D Transferase(Phosphotransferase) domain 1 28 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01308 Seca-Chr10 13120326 13124354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01308 85 138 MAP Kinase Kinase Kinase AT4G08500 61.111 1.14e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01308 K13414 - gmx:100819999 124.79