Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01251 ATGGCAGATAGTCCAGTATCGTTTTTATTGGACAAGCTGACTTCTTTACTTCAAGAAGAAGTGAATCTGCTAAGAGGGGTCCGTGAAAATGTTCAGTACATCAAAGATGAACTGGAGCGCCACAAGGCCATCTTGATGGAGGCTGATGTACTGGAAGACAAAGACCCTGAACTCAAAGTATGGGTTAAACGAGTGAGAGATATTGCTCATGACATGGAAGATGCTATAGATGAATACAATCTTCGCCTTGTTGACCAACATGGACGAAGCAACATTTTTTCTCTTCATAAGTTTGCTTTTGGCTTTAAGACCATGAAAGCTAGGCATCGGATTGCTTCACATATACAAGATATCAAATCCAAAGTGGAAGTGATCTCTCAGGGACGTCCCAGCACATCTGTCATAGGACCAAGCTCGACTCAAAGGTTGTCATCAAGGCTTGATAGCCAAGATGATGCCCTTTTGCTGGAGGAAGCTGATCTAGTGGGAATTGACAAACCCAAAAAGCAGCTGACGGATTTGCTTTTCAATGATGAACCAGGTCGGGCTGTGATTCCCATTTATGGAATGGGAGGGCTGGGGAAAACTACTTTGGCGAAACAAGTCTATGATGATCCAAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGGTTAATGCTTCTCAATCTTTCAAGATAAAAGAGCTGCTGAAGGACCTGGTTCAACAGCTCCATAATGTCATTGGAAAACCAGCTCCAGAAGCAGTTGGACAAATGAAAAGTGACAAGCTGAAAGAGGTGATCAAGAATTTGCTTCAACGAAGCAGGTACCTCATTGTGCTGGATGATGTATGGCATGTAAATGTCTGGGATGCTGTCAAACTTGCTTTGCCTAATAACAACCGTGGCAGTAGAGTGATGCTTACCACACGAAAGAAAGATATAGCCTTGTATTCCTGTGCTGAATTGGGTAAGGACTTTAACCCTGAATTCTTACCTGAGCAAGAAGCTTGGCCTCTTTTCTGTAGGAAGACATTTCAGGGTAACTCATGCCCTCCTCATCTGGAAGAAGTTTGCCGTAGTATCTTAAAAATGTGTGGGGGGTTGCCACTAGCAATTGTGGCAATCAGTGGTGCTTTGGCTACGAGAGGCAGGTCAAACATAGAAGAGTGGCAGATAGTTTGCAGAAGTTTTGGGGCTGAAATTGAAGGCAATGACAAGCTGGAAGATATGAAGAAAGTGCTTTCCCTAAGTTTCAATGAGTTACCTTACTATCTCAAATCCTGTCTGTTGTACCTGAGCATCTTCCCAGAATTTCATGCTATTGAGCATATGAGACTGATTCGCTTGTGGATAGCCGAAGGGTTTGTCAATGGAGAAGATGGAAAGACACTGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGAACAGAAGTCTGCTTCAAGTGGTAGAAAAAACCAGTGATGGCAGAATGAAGACTTGTCGCATGCATGACCTTCTAAGGGAGATTGTCAATTTGAAGTCAAAGGATCAGAACTTTGCAACAATAGCCAAAGAACAAGACATGATCTGGCCAGACAAAGTTCGACGCCTATCAGTCATAAACTCATCCCATAATGTACAACAAAATGGGACCATATTCCAACTTCGGTCTCTGCTAATGTTTGACTCATCAGATTCACTTGATCATTTCTCTATACGTGAATTCCGCTCCAGTGGTTATAAGTTACTCAGGGTGTTAGACTTGCAGGATGCACCTTTGGAGGTTTTTCCTGCTGAAATTGTCAGCCTTTTACTTCTGAAGTATCTAAGTCTGAAGAATACAAAGGTGAAAAACATTCCAGGTTCCATTAAGAAGCTGGGATACCTGGAGACATTAGATCTTAAACACACTTATGTCACTGAATTGCCAGTTGAAATTGTGGAGCTGCAACGATTACGCCATCTCCTGGTGTATCGTTATGAGGTTGAATCTTATGCTTATTTCCACTCAAAGTATGGCTTCAAGTTGGCTGCCCCAATAGGACGTATGCAATCTTTGCAAAAACTATGTTTTATAGAGGTAGACCAAGGAAGTAAAGCCTTGATGATTGAGCTAGGAAAACTTACCCAACTTAGGAGGCTGGGCATCAGAAAGATGAGGCAAGAAGATGGGGCAGCTTTATGTTCATCCATTGAGAAGATGATCAATCTCCGATCATTATCCATAACTGCAATTGATGATGATGAGATTATTGATATTCACAACATTTCCAGGCCTCCTCAGTATCTTCAGCAGCTATACTTGAGTGGACGTTTAGAGAAGTTGCCCCACTGGATAAGTTCTCTCAAGAATTTGGTCAAAGTGTTTCTAAAATGGAGCAGGTTAAAGGAGGATCCTCTGGTGTATCTTCAAGACTTGCCAAATCTAAGACATCTTGAGTTTCTTAAAGTTTATGTTGGTGAGACATTGCATTTCAAGGCTAAAGGGTTTCCCAGTCTGAAAGTGTTAGGCCTTGATGATTTAGATGGACTGAAATCTATAATAATGGAGGAGGGAACAATGCCTGGTCTTAAAAAGCTGATCATCCAGCAATGTGGTTCATTCAAGCATGCACCATTAGGCATTGAACACTTAACAAAGCTAAAAACAATTGAGTTTTTTGATATGCCTGAAGAGTTGATTATGGCACTGCGTCCAAATGTAGGCGAAGATTACTGGAGAGTACAACATGTCCCAGCAGTTTATTCCACATATTGGAGAGATGGTGCCTGGGATGTCTACTCATTGGAGACTTTTGCGGAGCGAGAGAGTGATTCCAGTCGCGGCACTGCAATGAGAAGTCTTGAACTTCGTTCTCTTTGGAGAAATATCATGGCAGAGAGTGCCGTGAGTTTTCTTCTCCAAAGGCTTGCGCCTGTATTTGAGAGTGAGGTGAATTTGTTCACAGGGGTTCGAGCAGAAGTGGTGTACCTAAAAGGACAGTTGGAGCTGATAAGGGCCTTCATAAGGGTTGCAGATGCATTGCAAGAAAGCGATGAAGAACTCAAAGTTTGGGTCAAGCAAGTCAGAGATGTTGCTCATGAGACTGAAGATCTTCTTGATGAATTGGAACTTGTCCAGGCACATAATCAAACAAAAGGATTCTCTATTTCTCTCCGTATCAAGAATATGAAAGCTCGTTATCGGATTGCTTATGGGTTGAAAGGCATCAATTCTCGCATGGGAACTATTTCTTCAATTCATAACAGATTTCTCAGAAAACTTGACACTGCTTCAGAGACTTCAAATTCCATTTATACAGGTAAGGCATGGCTTGATCAACGAGGAGATGCCCTTCTCCTGGACAACACTGATCTAGTGGGCATACACAGGCCTAAAAAGCAGTTGGTCGGGTGGTTGATTAAAGGTTGTCCTGGACGCAGAGTAATTTCTGTTACTGGAATGGGAGGGATGGGAAAAACTACTCTGGTGAAGAAAGTATATGATGATCCTGAAGTAATAAAACACTTCAAAGCCTGTGCTTGGGTTACTGTTTCTCAATCCTGTGACATTGAGGAGCTTCTCAGAGACTTGGCCCAAAAGCTTTTTTCTGAGATAAGAAGACCAGTTCCAGTAGACCTGGAAGGCATGCGTAGTGATAGGTTGAAGATGATTATTAAAGACCTGCTGCAGAGGAGGAGGTACCTTGTGGTATTTGATGATGTGTGGCATATGCATGAATGGGAAGCTGTCAAATATGCACTGCCTAACAATAACTGTGGCAGCAGGATTATGATCACCACACGCAAATCTGACTTAGCCTTTACTTCCAGCCTAGAATCTAAAGGTAAGATGCATAACTTGCAACCCTTGAAAGAAGACGAGGCCTGGGATCTATTTTGTAGAAAGACTTTTCAGGGTTGCTCATGCCCCTCCTATTTGATTAATATCTGTAAATACATCTTAAGAAAATGTGAGGGTCTGCCCCTTGCAATTGTGGCAATCAGTGGTGTCTTGGCTACAAAAGACAAGCACAGGATAGATGAGTGGGATATGATTTGCCGTTGTCTTGGAGCTGAAATTCAAGGCAATGGCAAACTTGATAATTTGAAAACAGTACTTGGACTTAGTTTTAATGATTTGCCTTACTATTTAAAGTACTGTTTCTTGTACTTAAGCATTTTTCCTGAGAACTATCTGATTCAGCGCATGAGATTGATTCGCTTGTGGATAGCAGAAGGATTTGTTGAAGCCAAAGAAGGAAAAACAATGGAAGATGTTGCAGAGGGTTACCTCAAGGAGCTTGTGAACAGAAACTTAATGCAAGTAGCAGAGACAACATCTGATGGAAGGGTCAAAACTTTGCGTATCCATGATCTTCTGCGGGAGATAATCATTTTGAAGTCTAAGGACCAAAACTTTGCAGCCATTGTCAAAGAACAAAATGTGGCATGGCCTGAAAAGATTCGGCGTCTTTCACTGCATAGCATATTACCAAATGGACAGCAACAGAGGTCTGTTTCTCAACTCCGTTCTCTCTTAATGTTTGGGGTTGTTGAAAATTTATCCCTAGGCAAACTGTTTCCAGGAGGTTTCAAATTGCTTAGTGTTTTAGATTTTCAAGATGCACCTTTGATGAAGTTTCCAGTTGCAGTTGTCGACCTGTATCATTTAAGATATCTAAGCTTAAGGAACACAAAGGTGAGAATGATTCCAGGTCGTATACTAGGGAAATTGCAGAATCTAGAAACATTGGATCTTAAGCAGACTTATGTTACAGAATTGCCTGCAGATATACTAAAACTTCAAAAACTTCGCCATCTCCTTGTGTATCAGTTTAAAGTCAAAGGTTTCTACTCCAAATATGGTTTCAAAGCCCCAACTGAAATAGGAAATTTACAGTCACTACAAAAGCTTTGTTTTGTGGAGGCAAACCAAGACTGTGGTATGATAATAAGGCAGTTAGGGGAGCTAAGTCAACTAAGAAGGTTAGGCATCATGAACCTCAGAGAGGAAGATGGGAAGGCTTTCTGTTTGTCCATTGAGAGATTGACTAATCTTCATGCCCTCGCTGTTACTTCTGAGGGTGAGGATAAAGTCATTGATCTGGGATTCCTTTCTTCACCCCCTCCATTGCTTCAACGCTTGTATTTGTCAGGATGTCTACAAGAGTTACCGTGTTGGATACCGTCTCTTCATGGCCTAGTCAGGTTATTTCTGAAATGGAGCCGTTTGAAACATGATCCACTGGTATATCTGCAGGATTTGACAAGCCTTGCCCATCTTGAACTACTTCAAGTTTATGATTGTGACACAATGCATTTTAGGTGTGGAAAGTTTAAGAAGCTCAAGGTTTTAGGTCTTGACAAATTTGATGGACTCAGTCAGGTGATAGTGGAGACGGGTGCAATGCCTTGCCTAGAAACACTGAGCATTGGGCGTTGTGAATTGTTGAAGAAGGTGCCATCAGGCACTGAACACTTGACTAAGCTGAAAGTCCTTGAGTTTTTTGATATGCCAGATGAACTGATGAAGACAATATGTCCACGTGGTCCAGGAATGGATCACTGGAAAGTTTCACATATACCAGAGGTTTATTCTACCTACTGGAGAGATGGTGGCTGGGATGTTTATGCACTAGACAGTTTCAGAGATTGTTCTCCCCAATCTGGCACATTCATGAGAAGCCATGAACGCCGCACTCCATGGAAGGTGTAG 5664 0.42 MADSPVSFLLDKLTSLLQEEVNLLRGVRENVQYIKDELERHKAILMEADVLEDKDPELKVWVKRVRDIAHDMEDAIDEYNLRLVDQHGRSNIFSLHKFAFGFKTMKARHRIASHIQDIKSKVEVISQGRPSTSVIGPSSTQRLSSRLDSQDDALLLEEADLVGIDKPKKQLTDLLFNDEPGRAVIPIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWVNASQSFKIKELLKDLVQQLHNVIGKPAPEAVGQMKSDKLKEVIKNLLQRSRYLIVLDDVWHVNVWDAVKLALPNNNRGSRVMLTTRKKDIALYSCAELGKDFNPEFLPEQEAWPLFCRKTFQGNSCPPHLEEVCRSILKMCGGLPLAIVAISGALATRGRSNIEEWQIVCRSFGAEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHMRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLNRSLLQVVEKTSDGRMKTCRMHDLLREIVNLKSKDQNFATIAKEQDMIWPDKVRRLSVINSSHNVQQNGTIFQLRSLLMFDSSDSLDHFSIREFRSSGYKLLRVLDLQDAPLEVFPAEIVSLLLLKYLSLKNTKVKNIPGSIKKLGYLETLDLKHTYVTELPVEIVELQRLRHLLVYRYEVESYAYFHSKYGFKLAAPIGRMQSLQKLCFIEVDQGSKALMIELGKLTQLRRLGIRKMRQEDGAALCSSIEKMINLRSLSITAIDDDEIIDIHNISRPPQYLQQLYLSGRLEKLPHWISSLKNLVKVFLKWSRLKEDPLVYLQDLPNLRHLEFLKVYVGETLHFKAKGFPSLKVLGLDDLDGLKSIIMEEGTMPGLKKLIIQQCGSFKHAPLGIEHLTKLKTIEFFDMPEELIMALRPNVGEDYWRVQHVPAVYSTYWRDGAWDVYSLETFAERESDSSRGTAMRSLELRSLWRNIMAESAVSFLLQRLAPVFESEVNLFTGVRAEVVYLKGQLELIRAFIRVADALQESDEELKVWVKQVRDVAHETEDLLDELELVQAHNQTKGFSISLRIKNMKARYRIAYGLKGINSRMGTISSIHNRFLRKLDTASETSNSIYTGKAWLDQRGDALLLDNTDLVGIHRPKKQLVGWLIKGCPGRRVISVTGMGGMGKTTLVKKVYDDPEVIKHFKACAWVTVSQSCDIEELLRDLAQKLFSEIRRPVPVDLEGMRSDRLKMIIKDLLQRRRYLVVFDDVWHMHEWEAVKYALPNNNCGSRIMITTRKSDLAFTSSLESKGKMHNLQPLKEDEAWDLFCRKTFQGCSCPSYLINICKYILRKCEGLPLAIVAISGVLATKDKHRIDEWDMICRCLGAEIQGNGKLDNLKTVLGLSFNDLPYYLKYCFLYLSIFPENYLIQRMRLIRLWIAEGFVEAKEGKTMEDVAEGYLKELVNRNLMQVAETTSDGRVKTLRIHDLLREIIILKSKDQNFAAIVKEQNVAWPEKIRRLSLHSILPNGQQQRSVSQLRSLLMFGVVENLSLGKLFPGGFKLLSVLDFQDAPLMKFPVAVVDLYHLRYLSLRNTKVRMIPGRILGKLQNLETLDLKQTYVTELPADILKLQKLRHLLVYQFKVKGFYSKYGFKAPTEIGNLQSLQKLCFVEANQDCGMIIRQLGELSQLRRLGIMNLREEDGKAFCLSIERLTNLHALAVTSEGEDKVIDLGFLSSPPPLLQRLYLSGCLQELPCWIPSLHGLVRLFLKWSRLKHDPLVYLQDLTSLAHLELLQVYDCDTMHFRCGKFKKLKVLGLDKFDGLSQVIVETGAMPCLETLSIGRCELLKKVPSGTEHLTKLKVLEFFDMPDELMKTICPRGPGMDHWKVSHIPEVYSTYWRDGGWDVYALDSFRDCSPQSGTFMRSHERRTPWKV. 1888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01251 1887 CDD RX-CC_like 2 126 IPR038005 -
Seca10g01251 1887 SMART LRR_typ_2 1537 1560 IPR003591 -
Seca10g01251 1887 SMART LRR_typ_2 1561 1584 IPR003591 -
Seca10g01251 1887 SMART LRR_typ_2 615 638 IPR003591 -
Seca10g01251 1887 FunFam Probable disease resistance protein At1g63360 1360 1449 - -
Seca10g01251 1887 Gene3D - 1104 1262 IPR027417 -
Seca10g01251 1887 FunFam Probable disease resistance protein At1g61300 1100 1264 - -
Seca10g01251 1887 FunFam Probable disease resistance protein At1g63360 412 500 - -
Seca10g01251 1887 Pfam Rx N-terminal domain 951 1038 IPR041118 -
Seca10g01251 1887 Pfam Rx N-terminal domain 6 90 IPR041118 -
Seca10g01251 1887 Gene3D Ribonuclease Inhibitor 1484 1837 IPR032675 -
Seca10g01251 1887 Gene3D Ribonuclease Inhibitor 537 883 IPR032675 -
Seca10g01251 1887 Pfam NB-ARC domain 166 413 IPR002182 GO:0043531
Seca10g01251 1887 Pfam NB-ARC domain 1114 1361 IPR002182 GO:0043531
Seca10g01251 1887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 426 IPR027417 -
Seca10g01251 1887 Gene3D - 5 112 - -
Seca10g01251 1887 Gene3D - 950 1053 - -
Seca10g01251 1887 Coils Coil 1008 1028 - -
Seca10g01251 1887 Gene3D - 1272 1359 IPR042197 -
Seca10g01251 1887 Gene3D - 325 411 IPR042197 -
Seca10g01251 1887 SUPERFAMILY L domain-like 1438 1825 - -
Seca10g01251 1887 PRINTS Disease resistance protein signature 613 629 - -
Seca10g01251 1887 PRINTS Disease resistance protein signature 359 373 - -
Seca10g01251 1887 PRINTS Disease resistance protein signature 264 278 - -
Seca10g01251 1887 PRINTS Disease resistance protein signature 184 199 - -
Seca10g01251 1887 PANTHER DISEASE RESISTANCE PROTEIN RP 32 857 IPR044974 GO:0006952
Seca10g01251 1887 FunFam Probable disease resistance protein At1g61300 149 316 - -
Seca10g01251 1887 SUPERFAMILY L domain-like 490 882 - -
Seca10g01251 1887 Gene3D - 412 502 IPR036388 -
Seca10g01251 1887 Gene3D - 1360 1450 IPR036388 -
Seca10g01251 1887 CDD RX-CC_like 948 1068 IPR038005 -
Seca10g01251 1887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1102 1374 IPR027417 -
Seca10g01251 1887 Gene3D - 149 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01251 Seca-Chr10 12399443 12410900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01251 185 626 WRKY Transcription Factor Family AT5G45050 21.598 7.34e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01251 K13457 - peu:105128333 1864.74