Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01247 ATGAGTTTGAGGCTCTTCCTTGCATGCAGGTTTGATGCTCGGGTAAGAGATCTCTTGGACTTCAGCATCTACTTAGACATTAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGACATAGTCTTGAAAGCATCAAGGCTAGTATTGAAGCAAGGAAGCCTGATTTTGACGCCTATATTGATCCTCAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTCATTCCTGATGACAATGAGGGGAAGATTCTAAGAGTGAGGTTGATACAGAAAGAGGGGGTTAAGTTCTTTAGCCCAGTTTACTTATTTGATGAGGGTTCTACCATTTCATGGATACCATGTGGAAGGAAGCTTACATGCTCTTACCCTGGCATCAAATTTTTCTATGGACCAGAGACTTACTTTGGAAATGAGGTGTCAGTTGTAGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATATGTTGAGAGCCACCTAAGCAACCTGTCAACAAAGTTCTATGGAGAGGTTACTCAACAGATGTTGAAGCATGCTGACTTCCCTGGTAGTAGCAATGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATCTATTTGAGCAGATAGTAGCCAGCAGGGCTGAGGCTCCAGTAGGAGCAGCAAAAGCTTAG 696 0.4267 MSLRLFLACRFDARVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKFFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSSNGTGLFQTIVGLKIRDLFEQIVASRAEAPVGAAKA. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01247 231 Gene3D - 5 120 IPR027417 -
Seca10g01247 231 Pfam Phosphoribulokinase / Uridine kinase family 10 85 IPR006083 GO:0005524|GO:0016301
Seca10g01247 231 ProSitePatterns Phosphoribulokinase signature. 36 49 IPR006082 GO:0005524|GO:0005975|GO:0008974
Seca10g01247 231 PANTHER URIDINE KINASE 13 132 - -
Seca10g01247 231 CDD PRK 11 176 - -
Seca10g01247 231 PRINTS Phosphoribulokinase family signature 54 77 IPR006082 GO:0005524|GO:0005975|GO:0008974
Seca10g01247 231 PRINTS Phosphoribulokinase family signature 36 53 IPR006082 GO:0005524|GO:0005975|GO:0008974
Seca10g01247 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 156 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01247 Seca-Chr10 12358244 12359800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01247 12 113 PRT Gene Family AT3G27440 32.039 1.76e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01247 K00855 - gmx:100777515 425.631