Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01223 ATGGGTGTTAACCTGACTCCAGGGGCGATAACAACTATGTGCAATGTCCATTTATTTTCGGAGAAGTTGAAGCCGGTGATGCAAGTTATTGACTTGAAACCAGTACAATTGCAAGAGGATAACTCCACAGAGAGGTATTTACTTGTCATCTCTGACGGTTCGCATTATCATTATGGGATGCTCGCCATGATGAAGAACGAGTTGGTCCATTCTGGAAGGTTACAGAAAGGTTCTATTGTTAGGTTCACTCAACTCGTCTACAATGTTGGCGAGCATTGCAGGTGA 285 0.4351 MGVNLTPGAITTMCNVHLFSEKLKPVMQVIDLKPVQLQEDNSTERYLLVISDGSHYHYGMLAMMKNELVHSGRLQKGSIVRFTQLVYNVGEHCR. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01223 94 Gene3D - 3 94 IPR012340 -
Seca10g01223 94 Pfam Replication factor-A protein 1, N-terminal domain 5 89 IPR007199 GO:0003677|GO:0005634|GO:0006260
Seca10g01223 94 SUPERFAMILY Nucleic acid-binding proteins 1 89 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01223 Seca-Chr10 12046478 12046762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01223 1 89 Core DNA Replication Machinery Family AT4G19130 46.667 2.45e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01223 K07466 - mtr:112421906 106.686