Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01187 ATGGCTGGGCAATCACGCAAGTGGATGATACTGGTCGCCACCATTTGGATTCAGGCATTTACCGGCACCAATTTTGATTTCTCTGAATATTCCTCCGCCATGAAATCCGCCCTCAACATCTCTCAGGTACAACTCAATTACCTCGCAACCGCCAACGATATGGGCAAGGTTTTTGGTTGGTCCTCTGGACTCGCTCTCATGTACCTTCCCCTCACTCTCGTCTTGTTCATTGCTGCTTCCATGGGTTTAATCGGTTATGGCCTTCAGTGGCTTCTCATCAACGACATCATCTCTTTGCCTTATTTCCTGGTCTTTCTTCTGTGTCTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACTGTATGTTTTGTTCTCTGCATTAGGAATTTCCCTGTTAACAGACCCCTTGCATTATCACTCACTGTGAGTTTCAATGGCGTAAGTGCAGCACTTTACACACTTGCTGCCAATTCAATAAACCCTTCATCTGATGCAATATATCTTCTTTTGAATGCCCTTGTTCCACTTCTCACTTCCCTTGCAGCATTAGCCCCAATTCTTCGGCAACCACCTTTAGATTCTCTTTCTCCAGAAGCTGCACGCAAGAACTCAGTTATATTTCTAATATTGAACTTCTTAGCCATTTTCACTGGCATTTATCTCCTTCTCTTTGCCTCATCTACTTCTGATGAATCCAGTGCACGCCTCTACTTTGGTGGAGCTATTTTTCTCCTCATTTGCCCACTCTGTATCCCTGGCATTATATATGCTCGAGATTGGTTTCACCATGCCATCCATTCCAGCTTTCAGGTGGAAAGCTCTGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCACAAAGAACTCATTACCCGTCAAAACAGTTCTCTTAGTCTCAGCAATGGAGATGGTCACAGCTTGTTGAGTGAAAATGGATCCATTTATGGAAGTCAGAGAGCAAAAAGTAGTGATGTGTGTTGTGATAGTATGCTTGGCCAGGATCAGTTGGTAATGCTAGGAGAAGAGCACACAGCAGCAGTGCTTGTCACTAGGTTGGATTTTTGGCTTTATTATGTTGCATATTTCTGTGGAGGTACAATTGGTCTTGTCTACAGCAATAATCTGGGACAGATAGCTCAATCTTTAGGCCTCAGTTCAAAAACCTCTACCCTTGTCACTCTATACTCATCCTTCTCCTTCTTTGGCCGCTTGCTTTCAGCTGCACCAGACTATATTAGAAAGAAGTTCTACTTTGCAAGGACAGCATGGCTAACCATTGCACTTGTACCAACCCCAATTGCATTCATCTTACTGGCTGCATCAGACAGTGCTGTGGCACTTCATATAGGCACTGCACTAATTGGTTTGAGCTCTGGTTTCATATTTGCTGCTGCTGTGGCTGTTACATCTGAGCTATTTGGACCTAACAGTGTGAGCGTAAATCACAACATTCTCATAACAAATATCCCAATTGGGTCACTTCTCTATGGTTTTCTAGCTGCAGTAGTTTATGAAGCCAATGCTAACTCATCACCTGGGAACTTAATGTCTGACTCACTTGTGTGCATGGGAAGACAGTGCTACTTTTGGACATTTGTCTTGTGGGGATGCTTATCTGTGCTGGGACTAGCTTCTAGTTTGCTGTTATTCTTAAGAACCAAACATGCATATGATCATTTTGAGAGACACCGTATTTCAGCACAAACAATTGTGTCTTAA 1722 0.4332 MAGQSRKWMILVATIWIQAFTGTNFDFSEYSSAMKSALNISQVQLNYLATANDMGKVFGWSSGLALMYLPLTLVLFIAASMGLIGYGLQWLLINDIISLPYFLVFLLCLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSINPSSDAIYLLLNALVPLLTSLAALAPILRQPPLDSLSPEAARKNSVIFLILNFLAIFTGIYLLLFASSTSDESSARLYFGGAIFLLICPLCIPGIIYARDWFHHAIHSSFQVESSGFILVHVDDLELHKELITRQNSSLSLSNGDGHSLLSENGSIYGSQRAKSSDVCCDSMLGQDQLVMLGEEHTAAVLVTRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGLSSKTSTLVTLYSSFSFFGRLLSAAPDYIRKKFYFARTAWLTIALVPTPIAFILLAASDSAVALHIGTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLYGFLAAVVYEANANSSPGNLMSDSLVCMGRQCYFWTFVLWGCLSVLGLASSLLLFLRTKHAYDHFERHRISAQTIVS. 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01187 573 Gene3D MFS general substrate transporter like domains 354 571 IPR036259 -
Seca10g01187 573 Pfam Nodulin-like 7 252 IPR010658 -
Seca10g01187 573 SUPERFAMILY MFS general substrate transporter 6 556 IPR036259 -
Seca10g01187 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01187 Seca-Chr10 11667862 11672562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01187 1 567 Nodulin-like Gene Family AT1G31470 59.754 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01187 - - gmx:100814771 962.985