Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01186 ATGTCAGACATTCTCAAAGAAGTTGCAGCCCAAGAGTATGGGAAATTTGAAGTCAATTTCAGTAGGAAAAGTGTTGTAAAAGCAGCCAACCCTTTACCAAAGCCATTTTCTATCACTCTCACAAATCTTGATCTGCTTTCAGGCCGTTTTCCTGTTACATACTTGTATTTCTACCGCAGACCAAAACTAGGTAACTTTAATGCTTTTGTTGAGGCTCTTAAGAGCTCTCTAGCACAAATTCTTAGTTACTACTACCCCTTTTCTGGCCAAATTGTTCAAAATCCCAAAACTAGTGAACCTGAGATCATTTGTGACAACAATGGTGCTCTAGTCATTGAAGCAAACTTAAATACCCCACTAAAGAATTTAGATTTTTATAATCTCAATGAAACCCTTCAAGAAAAGATAGTCTCAGTTCAACCAGATTTCCCTTTGCAAATTCAGGTAACAGAATTCACTTGTGGTGGCATATCTATAGCATTTACTTTTGACCATGCATTAGGTGATGCAAGTTCCTTTGGTAAATTTATTGCCTCATGGTGTGAAATAGCTCAAAATAAGCCACTGTCATGCTTACCAGACCATAGTAGACACCTTTGTGCACGTTCCCCTCCCAAATATCAACCATCCTTGGACCAAACTTTCATCAAATGCACCATGGAAGAGATACAAAACATGCAAATGAACCGCATCTCACTTAAACGCCTTTATCATATCAATGCATCAAGTATCAACATGCTGCAGAGGCTTGCTTCTGTTAATGGCACTAAGAGAACAAAGATTGAGGCTTTCTCTGCCTATGTATGGAGGATAATGATTGGCACAATTGATCAAAGCCATAAAAAGTGCAAGATGGGTTGGTTAGTGGATGGAAGAGAGAGAATGGGTAGAGGTAAGAATTCCATGTCAAATTACATTGGTAATGTCCTGTCTTTGGCTTTTGCTGAGGCAAGCATTCAAGAATTGAAGGAAGCCTCATTATCAGACACTGGTAACATAGTGCATGAGGCAATTTCAAAGGTTAGCAATGAGGCTCATTTTTTGGATTTGATTGATTGGATTGAGAGTCATAGGCCTGGTTTGATGCTAGCAAAGGCAGTATTGGGTCAGGATGGGCCAGCACTGGTGGTGTCCTCTGGACAAAGGTTTCCTGTCACTGAAGTGGACTTTGGATTTGGGAGTCCTTTGTTAGGGACAGTGTACACTTCCATTGAAGGCGTAGGAGTTGGTTACATGAACCAAAGGCCTAGTGCTAATGGTGATGGTTCATGGACTGTGTCTGCTATATTGTGGCCTGAACTGGCAGCTGCACTGAAGGATGACCCAATTTTCCAGCCCATGACTGCTTCTCATCTTCAACTCTAG 1365 0.4103 MSDILKEVAAQEYGKFEVNFSRKSVVKAANPLPKPFSITLTNLDLLSGRFPVTYLYFYRRPKLGNFNAFVEALKSSLAQILSYYYPFSGQIVQNPKTSEPEIICDNNGALVIEANLNTPLKNLDFYNLNETLQEKIVSVQPDFPLQIQVTEFTCGGISIAFTFDHALGDASSFGKFIASWCEIAQNKPLSCLPDHSRHLCARSPPKYQPSLDQTFIKCTMEEIQNMQMNRISLKRLYHINASSINMLQRLASVNGTKRTKIEAFSAYVWRIMIGTIDQSHKKCKMGWLVDGRERMGRGKNSMSNYIGNVLSLAFAEASIQELKEASLSDTGNIVHEAISKVSNEAHFLDLIDWIESHRPGLMLAKAVLGQDGPALVVSSGQRFPVTEVDFGFGSPLLGTVYTSIEGVGVGYMNQRPSANGDGSWTVSAILWPELAAALKDDPIFQPMTASHLQL. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01186 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 403 - -
Seca10g01186 454 Gene3D - 12 214 IPR023213 -
Seca10g01186 454 Gene3D - 217 440 IPR023213 -
Seca10g01186 454 Pfam Transferase family 17 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01186 Seca-Chr10 11656228 11657592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01186 17 433 Monolignol Biosynthesis Gene Families AT5G48930 25.513 1.37e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01186 - - gmx:100795616 759.985