Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01183 ATGCCACCACCCTCAACCTGCCTTTCATTAACAAACTTCCTTCAAAGTGCCACCGCCTGGTTTCCCCTACCCATTGAACACCGTGCACCCCATTCTCCATTTCAGCTGATATTCACATATGGAAATGCAAGTTTGTGGATTTTCCATTGTGGAAACGAATGGGGCATTATGGAGGCTAGCTTGATTAGGCTAAACTCTGCAGTTATAATGGAGTGCACAAGAATAGGTCGATGGTTAAACCTTCTACTGTGTGTACTGCTATTGCTGAGGGCAGAAGCTGCTTATGTACCAATCACTTATCTCCAGAGTGCAGTAGCAAAAGGAGCCGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGGATCAGGGAATAACAGTTGGTTAGTTCAATTTGAGGGAGGGGGATGGTGCAACAATGTCACTAGTTGCCTTGCTCGCAAGAACGGTCGTTTAGGTTCATCTAAGCAAATGGGCAAGCAAATTGCCTTTTCAGGAATTTTAAGTAACCAGCGAATGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGATCATCATTTACTGGTGATGTGGAAGCTGTCAACCCAGTAACTAAGTTGCACTTCAGAGGAGCAAGGATTTTTAATGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAGTACTGCATTGTGATCGTTTTCGAGCTCTATTACCATCAGGAGCTAAAGTGAAGTGCCTTTCAGATGCTGGTTACTTTATCAATGCAAGGGATGTCTCTGGAGCACAGCACATTGAACAGTACTTCAGTCAAGTTGTTGCCACACATGGCTCTGCAAGGAATTTGGCTCAATCATGCACTTCAAGACTCAGTCCAGGGCTGTGCTTTTTCCCACAATATTTGGTATCACAAATCACTACACCAATCTTCTTTGTAAATGCGGCATACGACTCATGGCAGATCAAGAACGTTTTGGCACCGGGTGTTGCTGATCCTCATGGCCATTGGCATAACTGCAAGTTAGATATAAACAACTGCTCACCTTATCAACTCGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCTTTGACTGTGCTGCGCAACTCTCCATCTAAAGGACTTTTTATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAGGAGACATGGTTCAGAAGTGACTCTCCAATGCTTGGCAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAGAGAAGGCCCTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCCACTTGTCACAACCGCGTTTTTGAACCCCCACAAGACCACCCTGGAGTATAG 1410 0.4376 MPPPSTCLSLTNFLQSATAWFPLPIEHRAPHSPFQLIFTYGNASLWIFHCGNEWGIMEASLIRLNSAVIMECTRIGRWLNLLLCVLLLLRAEAAYVPITYLQSAVAKGAVCLDGSPPAYHFDKGFGSGNNSWLVQFEGGGWCNNVTSCLARKNGRLGSSKQMGKQIAFSGILSNQRMFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFNAVIEDLLAKGMKNARNAIISGCSAGGLTSVLHCDRFRALLPSGAKVKCLSDAGYFINARDVSGAQHIEQYFSQVVATHGSARNLAQSCTSRLSPGLCFFPQYLVSQITTPIFFVNAAYDSWQIKNVLAPGVADPHGHWHNCKLDINNCSPYQLDLMQGFRTEFLRALTVLRNSPSKGLFIDSCYAHCQTEMQETWFRSDSPMLGKTTIAKAVADWFYERRPFHQIDCPYPCNPTCHNRVFEPPQDHPGV. 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01183 469 Pfam Pectinacetylesterase 90 440 IPR004963 GO:0016787
Seca10g01183 469 PANTHER NOTUM-RELATED 81 457 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01183 Seca-Chr10 11608043 11615668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01183 74 467 Carbohydrate Esterase AT4G19420 60.373 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01183 K19882 - gmx:100776478 736.102