Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01174 ATGAAGCCCTTTTCTCTCATGTTACCTGCTGCATTCTGGTCTATATGCCTTCACATACTTTTTATTTTAAGCTCACTCTCGTTTGGCCCAAACGCAACTGCCTCTTCTGCTTTCGGTAATGAGACTGACCATTTGGCGTTGTTGAAATTGAAGGAATCAATATCCAATGACCCATTTGGAATTCTACATTCTTGGAATGCTTCTACCCATTTCTGCAACTGGCATGGAGTCACATGCATGCACCAAAGAGTAACAGAGTTGAACTTACAAGGATATCAGTTGCATGGATCCTTATCTCAACATGTTGGTAATCTCTCTTTTCTGAGACACCTTAATCTCGGAAACAACAGTTTCCATGGAAAGATCCCACAAGAATTGGGTCGGTTGTTACAATTGCAGTATCTCTATCTCACCAATAACTCCTTCACAGGGGAGATTCCTACAAACTTGACAAGTTGCTCTAATCTCAAAGACTTGTTCTTAGATGGAAATAATCTGATTGGCAAAATACCAATTGGAATCGGCTCTCTTTGGAAGCTTCAATCATTGACGGTTGGGAAAAACAATTTAACTGGAGGATTCCCTCCATTTATAGGGAATCTTTCATCCCTCATCCGTGTCTCGGTGGCTTATAATAACTTAGAGGGAGATATTCCACAACAAATATGCCGCCTCAAAAATCTGACAGTGATAGTAGTGGAAGTGAACAAACTATCTGGTACATTTCCTTCTTGCCTTTACAATATGTCATCTCTTATTGTGATCTCAGTTGCAGATAATTACTTTGACGGCACTCTTCAACCCAACATGTTCCACACACTCCCCAATCTCCAATTTTTTTCAATTGGTAGGAATCAATTCTCAGGTCCAATCCCCACTTCCGTGGCAAATGTGTCTACCCTTACACTACTTGATATCGTTGTAAACCATTTTGTTGGAAACGTTCCAAGTCTAGGGAGGCTACAAGATCTTCAGTGGCTAAATCTGGGTAGAAACAGTCTAGGTGACAATTCAATGAATGATTTGGAGTTTTTAAAATCATTGACAAATTGTAGTAAGTTGCAAATGTTAAGTATATCCTATAATAATTTTGGAGGTAGTTTGCCAAATTCCTGGGGTAATCTCTCCACCCAACTCAACCGACTATATGTTGGAGGTAACCACATATCAGGAAAAATTCCCACAGAATTAGGAAATCTAATTAGCTTAACTCTCTTGACCATGGAACTAAATCATTTTGAAGGGACTATTCCAACTACTTTCGGCAGGTTTCAAAATATGCAATTGTTAGCATTGGGTGGAAACCAGCTATCAGGAAATATACCAGCCTTTGTAGGAAATCTCAGTCAATTGTTTTATTTGGATTTATCACAAAATATGTTAGAAGGAAATATTCCTCCAAGCATAGGAACCTGCCAAAAGTTGCAATCACTAAAGCTTTCGCAAAACAACCTTAGAGGAACCATACCTCATGAGGTTTTTAGCGTTTTCTCATTAACAAACTTATTGGACTTGTCACAAAACTCTTTGAGTGGCACTCTCCCTGGTGAAGTGGGCAGGTTAACAAATATAAATTGGTTAGATCTCTCTGAGAATCTTCTGTCTGGTAACATTCCTGGAACCATTGGACAATGCATGAGATTGGAGTACCTTTATTTGCAAGGAAATTCCTTTCATGGTATCATGCCATCCTCCTTGGCTTCACTCAAAGGACTTCAACGTGTAGACCTGTCACGAAACAGCTTGTCTGGATCAATTCCCAAAGGTTTCCAAAATATTTCATTTTTAGAATACTTGAATGTTTCTTATAACATGTTGAATGGTGAGGTACCAACAGAAGGTGTCTTTCAAAATGCAAGCAAGTTAGGAGTGGCCGGAAACAATAAGCTTTGTGGAGGTATTCCAGAGTTGCATCTACCGCCATGCCCTGTCAAAGGTATGAAACATGCAAAACACCATAGGTTGATGGCAGTGATAGTTAGTGTGGTTGCTTTTCTTTTCATATTATCCCTTGTTCTAACTATCTACTGGATGAGGACAAGAAACAAGAAACCATCTTCTGATGAATCAACAATTGGTCAGTTGTCTAAGGTCTCATACCAAGACCTATATCATGGAACCGATGGGTTCTCGGCTGAAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATCTTATGTCAGAAGATGATGTTGTTGCCGTAAAGGTGTTGAACCTTCAAAGGAAAGGAGCTCACAAGAGTTTCATTACCGAATGCAATGCACTTAAAAATATTAGACATCGAAATCTGGTGAAAATTTTAACATGTTGTTCTAGTACAGATTACAAAGGCCAAGAATTCAAAGCTCTAGTTTTTGAGTACATGAAAAATGGAAGCTTAGAACAATGGCTGCATCCAAGGACAGCAGGTGAAGAGCATCCAAGAACACTAGACCTTGATCAAAGATTAAATATCATTATGGATGTTGCTTCTGCATTACATTATCTTCATCTTGAATGTGAGCAATTGGTCCTTCATTGTGATCTGAAGCCAAGCAATGTCCTACTTGATGATGGCATGGTTGCTCATGTGAGTGACTTTGGCATAGCAACACTTGTCTCAACCATTGACGGTACCTCTCATAAGCAAACTAGTACAACTGGAATAAAAGGGACTGTTGGCTATGCTCCCCCGGAGTATGGAGTAGGTTCTGAAGTGTCCACACATGGTGACATGTATAGCTTCGGGATTCTTGTGTTGGAAATGCTTACGGGAAGAACACCAACCGATGAAGTGTTTGAAGATGGTCAAAATCTGCATAAGTTTGTTGAGATTTCATTTCCTGATAATCTTTTACAGATTTTGGACCCACCTCTTGTACCAACAGATGAAGAAGCAGCAAGAGAAGAAGAAATTAGTGGGGAGCTCATTTTAACTGTAAAGAAGTGCTTTGTTTCACTTTTTAGGATTGGACTTGCTTGTTCAGTGGAATCACCAAGAGAAAGAATGAATATAGTGGATGTCATTAGAGAGCTAAACAAAATCAGAAACGCCTTTCTCAATGATCTCATTGGAGAGCTTGAACTCACATGCACTAGTTCTGGCCAAGGGTTCAAATCTGATAGATATGTCTTCCTCCATACATGA 3138 0.3939 MKPFSLMLPAAFWSICLHILFILSSLSFGPNATASSAFGNETDHLALLKLKESISNDPFGILHSWNASTHFCNWHGVTCMHQRVTELNLQGYQLHGSLSQHVGNLSFLRHLNLGNNSFHGKIPQELGRLLQLQYLYLTNNSFTGEIPTNLTSCSNLKDLFLDGNNLIGKIPIGIGSLWKLQSLTVGKNNLTGGFPPFIGNLSSLIRVSVAYNNLEGDIPQQICRLKNLTVIVVEVNKLSGTFPSCLYNMSSLIVISVADNYFDGTLQPNMFHTLPNLQFFSIGRNQFSGPIPTSVANVSTLTLLDIVVNHFVGNVPSLGRLQDLQWLNLGRNSLGDNSMNDLEFLKSLTNCSKLQMLSISYNNFGGSLPNSWGNLSTQLNRLYVGGNHISGKIPTELGNLISLTLLTMELNHFEGTIPTTFGRFQNMQLLALGGNQLSGNIPAFVGNLSQLFYLDLSQNMLEGNIPPSIGTCQKLQSLKLSQNNLRGTIPHEVFSVFSLTNLLDLSQNSLSGTLPGEVGRLTNINWLDLSENLLSGNIPGTIGQCMRLEYLYLQGNSFHGIMPSSLASLKGLQRVDLSRNSLSGSIPKGFQNISFLEYLNVSYNMLNGEVPTEGVFQNASKLGVAGNNKLCGGIPELHLPPCPVKGMKHAKHHRLMAVIVSVVAFLFILSLVLTIYWMRTRNKKPSSDESTIGQLSKVSYQDLYHGTDGFSAENLIGSGSFGSVYKGNLMSEDDVVAVKVLNLQRKGAHKSFITECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFEYMKNGSLEQWLHPRTAGEEHPRTLDLDQRLNIIMDVASALHYLHLECEQLVLHCDLKPSNVLLDDGMVAHVSDFGIATLVSTIDGTSHKQTSTTGIKGTVGYAPPEYGVGSEVSTHGDMYSFGILVLEMLTGRTPTDEVFEDGQNLHKFVEISFPDNLLQILDPPLVPTDEEAAREEEISGELILTVKKCFVSLFRIGLACSVESPRERMNIVDVIRELNKIRNAFLNDLIGELELTCTSSGQGFKSDRYVFLHT. 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01174 1045 Gene3D Phosphorylase Kinase; domain 1 673 791 - -
Seca10g01174 1045 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 792 1021 - -
Seca10g01174 1045 FunFam LRR receptor-like serine/threonine-protein kinase EFR 681 791 - -
Seca10g01174 1045 Gene3D Ribonuclease Inhibitor 270 337 IPR032675 -
Seca10g01174 1045 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Seca10g01174 1045 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Seca10g01174 1045 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 648 - -
Seca10g01174 1045 Gene3D Ribonuclease Inhibitor 338 643 IPR032675 -
Seca10g01174 1045 ProSiteProfiles Protein kinase domain profile. 710 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g01174 1045 SUPERFAMILY L domain-like 377 632 - -
Seca10g01174 1045 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Seca10g01174 1045 Gene3D Ribonuclease Inhibitor 42 152 IPR032675 -
Seca10g01174 1045 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Seca10g01174 1045 SUPERFAMILY Protein kinase-like (PK-like) 683 1009 IPR011009 -
Seca10g01174 1045 SMART serkin_6 710 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g01174 1045 Gene3D Ribonuclease Inhibitor 153 267 IPR032675 -
Seca10g01174 1045 Pfam Leucine Rich Repeat 108 127 IPR001611 GO:0005515
Seca10g01174 1045 SMART LRR_typ_2 473 496 IPR003591 -
Seca10g01174 1045 SMART LRR_typ_2 569 592 IPR003591 -
Seca10g01174 1045 SMART LRR_typ_2 521 545 IPR003591 -
Seca10g01174 1045 SMART LRR_typ_2 201 225 IPR003591 -
Seca10g01174 1045 SMART LRR_typ_2 448 472 IPR003591 -
Seca10g01174 1045 SMART LRR_typ_2 593 618 IPR003591 -
Seca10g01174 1045 SMART LRR_typ_2 105 129 IPR003591 -
Seca10g01174 1045 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 346 1010 - -
Seca10g01174 1045 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 77 342 - -
Seca10g01174 1045 Gene3D Transferase(Phosphotransferase) domain 1 792 1021 - -
Seca10g01174 1045 SUPERFAMILY L domain-like 40 334 - -
Seca10g01174 1045 Pfam Protein kinase domain 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01174 Seca-Chr10 11523588 11527520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01174 37 1017 Receptor kinase-like Gene Family AT3G47570 46.386 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca10g01174 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01174 - - gmx:100785561 1393.25