Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01147 ATGGTGTTGGTGCAGCTCTTCTATGGTGGCTACCATGTCATCACCAAAGTGGCTCTTAATGTTGGGGTCAACCAACTAGTCTTCTGCCTCTACCGGGATCTCCTTGCCTTCTCTATCATTTCTCCCATCGCTTATTTCAATGAAAGACGGACAAGACCGCCCATTACAAAGCAGCTATTGTGGTCATTCTTCCTTCTTGGATTAACTGGGATATTTGGCAACCAGCTCTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCCGTACAACCAGCCATTCCAGTCTTTACATTTCTGTTTGCTGTAATGATGGGTACAGAAAGAGTGAACTTGTTCAGATATGAAGGTCTGGCAAAGGCTGGAGGAACTCTTATCTGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGTGGCCCAGCTTTGATAGGAGATACAGAAATGGACCACATGGCACAAAATGAAGTAAGTGCCAGAGGTCAGCCAGAGCCATCTGGATGGTTAATCAGTGGTTTACAAGGTCTTGGTTTAGACCATTTTGAACTTGGGGTTATATGCTTGATAGGGAACTGTATGTGCATGGCTGCTTTTCTAGCCATTCAGGCACCATTGTTAAAGAAGTATCCTGCAAACCTATCTGTCACAGCGTATTCATTCTTCTTTGGAGTTGTACTAATGGTGATAGTATCGACATTCATGACTAATGGGTTAAGTGACTGGATTTTGACACAATCAGAATTACTTGCCGTTATATATGCTGGAACTATTGCATCTGCCCTTAACTATGGAATCGTTACATGGAGCAACAAGATCATAGGGCCAGCTTTGGTTGCTCTTTATATGCCCCTTCAACCTGGTTTTTCCTCCATACTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGATCTTTAATCATTGCTGGTCTTTATACGGTTACTTGGGCATCTTATAGAGAAAGACAAGCAACAGTTGGAGTTACTCCTCATGAGTCATGGGTCTCTGAACCACTTGTTCATGAAAAAAGTGCATACCAAAGAGATCACTTCTATTCCGGGTCATCCTCCTCCAATGTATCCTCAGACCCAAAGTCATCAGATTAA 1128 0.4238 MVLVQLFYGGYHVITKVALNVGVNQLVFCLYRDLLAFSIISPIAYFNERRTRPPITKQLLWSFFLLGLTGIFGNQLLFLIGLSYTNPTYAAAVQPAIPVFTFLFAVMMGTERVNLFRYEGLAKAGGTLICVSGAILMVLYRGPALIGDTEMDHMAQNEVSARGQPEPSGWLISGLQGLGLDHFELGVICLIGNCMCMAAFLAIQAPLLKKYPANLSVTAYSFFFGVVLMVIVSTFMTNGLSDWILTQSELLAVIYAGTIASALNYGIVTWSNKIIGPALVALYMPLQPGFSSILSQIFLGSPIYLGSIIGGSLIIAGLYTVTWASYRERQATVGVTPHESWVSEPLVHEKSAYQRDHFYSGSSSSNVSSDPKSSD. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01147 375 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Seca10g01147 375 Pfam EamA-like transporter family 2 122 IPR000620 GO:0016020
Seca10g01147 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 327 - -
Seca10g01147 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 35 139 - -
Seca10g01147 375 PANTHER WAT1-RELATED PROTEIN 1 329 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01147 Seca-Chr10 11061074 11065446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01147 80 351 Nodulin-like Gene Family AT5G45370 61.232 4.15e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01147 - - gmx:100793730 571.237