Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01146 ATGGCAGCATCTTCAGTATCAGTGGGGGGTGACATATGGAAGGCCCATTTGGCCATGGCGTTGGTTCAGCTATTCAATGGCGGTTACCATGTCATCACCAAGGTGGCCCTTAATGTTGGCATCAACCAATTAGTCTTCTGTGTCTTCCGTGATCTCCTTGCCCTTACAATCCTTGCACCCCTTGCTTATATCCGTGAAAAGTATGATCTTTTTCCCCCTTCTCTCTACGTTCTTTTCAAATCAACCATCAGCGATTATACTTGTTCTGTGTGCAGCCCTTTTATTCTTCTGTGTTTCTCGGTTGGATTGGATGCAATTGAAAGATGCGACTCCATTATTATCATGTATGAGGATGACTGGCGGATACGGCCACCCATCACTAAGAACCTCCTGATGTCATTCTTCTTTCTTGGATTGACTGGGATATTTGGCAACCAACTTTTGTTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCTGCTGCCACACAGCCAGCCATTCCAGTCTTTACATTTCTGTTGGCTGTCATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTTGCAAAGGTTGGAGGAACTATTATCTGTGTTTCAGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGTTTTGATAGGACGTGAAGAAATTGATCGGGTAGTACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCTTCTGGATGGTTAATGGGAGGTTTACAGGATCTTGGGTTAGACCATTTTCATATTGGGGTTCTGTGCTTGATAGGGAACTGCATGTGCATGGCTGCTTTTCTAGCCATTCAGGCGCCAGTATTAAGAAAATATCCCGCAAACATATCTGTCACAGCATATTCATACTTCTTCGGAGCTGCACTGATGGTGACAGTGTCTTTGTTCATGACTGATGAGTCAACTGACTGGAGTTTGACATCATCAGAAATACTCGCTGTTACTTACGCTGGAACTATTGCATCTGCCCTTAATTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAGCTTTGGTTGCCCTTTACAATCCACTTCAACCTGCGTTTTCTGCCCTTCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGATCTTTCATCATTGCTGGTCTATATACGGTTACTTGGGGATCATATAAAGAAAAACAGGCAACTGTTGGAGTTACTCCTCATGCGGTTTCAACTTCACCTCTCACGAAATGCTATGCTTTCTTCAAACACCTAACCCCATCTCCTCAATCCAACTGGGTATTCTCTCCATCGCAAAAAGACATGATCTTTGCTAAAATCACAGCACTAGTATCTTCCTTATTGCCCTCCCTACAATCCTCACCTTCTCCCCTCCCCAACACTCTTCCTTTCATCACCACCACCAACAACAACCTTCGAATCTCTTCCTCTCTTCAGGATTTTTCCTCTTACTCCAACCTCGATGCCGGTGTCGCCACCCATTTGAAGCAACCCCTCTACAAGGCGGTTCAAGGAGGAACAACCACTTCTTCCCGCAAGAAATGCATCAGGTTCATAAGGCTTGCACTGTGCCTTACGTTGTTTCTTTTCATAACCTACTTGATTTTGATGCTTGCTTATTCTTTATGGAATTATGGGTCGGGTAAGTATTATGTTGTGCTTGATTGTGGGAGTACCGGGACTCGGGTCTATGTGTATCATGCTTCCATTCAATACAAAAGGCATAGTAGTCTTCCTATAGCCATCAAGTCATTGAGGGATGTGTTGCACAAGAAGCCTATTGGGCGTGCCTATGATAGAATGGAAACTGAACCTGGCCTTGATAAGCTGGTGCACAATGTGTCTGGTTTGAAAGGTGCATTGAAACCACTAGTTAGGTGGGCTAAAAAGCAAATACCAGTTCATGCTCATAAGAGTACTTCTTTGTTCCTTTATGCCACTGCTGGTGTTAGGAGACTCCCTGTGAAGGAATCTAAATGGCTGCTAGATAATGCCTGGTCTGTGATCAAGGACTCTCCTTTTATGTGTAGGAAGGAATGGGTTAAGATTATCTCTGGCACTGAGGAAGCTTACTTTGGATGGATAGCACTGAATTATCATAGTGGCATCTTGGGGGTTAGACCTAGGAAGGCAACTTATGGTGCACTTGACTTGGGGGGTTCGTCATTGCAGGTTACATTTGAGAGTGATCAGCAACTGAATAGTGAGACTAGCTTGTATGTTAGGATTGGATCAGTGAACCACCATCTCACTGCATATTCTCTCTCGGGCTATGGTCTCAATGAGGCGTTTGATAAGTCTGTGGTGCGTCTCTTTAAGAAAGAGTTTGGATCTGCCAATGCAGATATAGCTGATAAAAAAATAGAGCTCAAACATCCTTGCTTGCAGTCTGGCTACAAGGAGCAATATGTTTGCTCTCATTGTTCTTCTGGGAATGGAGATGGAAGTCTTACTGTTAAGGGGAAGCAACAGGGTAAGCAAGGAGGATCAGGAACCCCATTAGTGCTTGTTGGTGCACCAAATTGGCAACAATGCAGTGCACTCACAAAAGTTGTTGTCAATTTGTCTGAATGGTCCAATCTCAGTACAGGACTTGATTGTGGAGTCCAACCTTGTGCTTTGCGTGATAATCTCCCTCGCCCATATGGCCACTTTTATGTGATTTCTGGGTTTTATGTGGTATATCGGTTTTTCAACTTAACTTCGGAAGCCACACTTGATGATGTATTGAAAAAGGGTAAGGAATTCTGTGAAAAAGAATGGGATGTTGCTAAGAAAAGTGTTGCTCCTCAACCCTTTATTGACCAGTACTGCTTTAGGGCACCATACATTGCTTCACTGCTAAGAGAGGGTTTGCACATTAATGATAACCAAATAACTGTTGGCTCTGGAAGCATCACTTGGACACTTGGGGTTGCCTTGTTGGAAGCTGGGAAGGCATATTCCACTAGGTTTGGGATTCGTGACTTGGAATTGCTCCAGATGAAGATAAATCCTCTCATTCTTATGCCCATTTTGTTGCTTTCTTTTATTCTCCTCCTTTGTGCTCTATCATGTGTTGGCAATTGGATGCCAAGGATTTTCCGGAGGCAATATCTTCCCATTTTCAGGCATAACAGTGTTTCCAGTGCTTCTGTTCTTAACATCCCATCTCCTTTTCGGTTCAAGCGATGGAGTCCAATGAACGCCGGGGATGGAAGAATAAAGACGCCACTTAGCCCCACAATTGCAGGTTCACAAGGAAGCCCATTTGCCCTGGGGCATGGTTTTGGTGATAACAGTGATGGCATCCAACTTATGGAGTCTTCCTTGTACCCCTCAGCCAGTGGCGTCTCACATAGTTTTTCCTCAAACAGTTTAGGGCAGATGCAGTTTGACAGTGGTGCCTTCCGGTCTCCCCATAGAAGTCAGATGCGTCTGCAGAGTAGGAGATCACAGTCTCGAGAAGACCTGAATTCCTCAGTGGCCGAAGCACACCTGGTGAAGGTTTAA 3516 0.4428 MAASSVSVGGDIWKAHLAMALVQLFNGGYHVITKVALNVGINQLVFCVFRDLLALTILAPLAYIREKYDLFPPSLYVLFKSTISDYTCSVCSPFILLCFSVGLDAIERCDSIIIMYEDDWRIRPPITKNLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTIICVSGAILMVLYRGPVLIGREEIDRVVQNEISARGQPEPSGWLMGGLQDLGLDHFHIGVLCLIGNCMCMAAFLAIQAPVLRKYPANISVTAYSYFFGAALMVTVSLFMTDESTDWSLTSSEILAVTYAGTIASALNYGLITWCNKILGPALVALYNPLQPAFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWGSYKEKQATVGVTPHAVSTSPLTKCYAFFKHLTPSPQSNWVFSPSQKDMIFAKITALVSSLLPSLQSSPSPLPNTLPFITTTNNNLRISSSLQDFSSYSNLDAGVATHLKQPLYKAVQGGTTTSSRKKCIRFIRLALCLTLFLFITYLILMLAYSLWNYGSGKYYVVLDCGSTGTRVYVYHASIQYKRHSSLPIAIKSLRDVLHKKPIGRAYDRMETEPGLDKLVHNVSGLKGALKPLVRWAKKQIPVHAHKSTSLFLYATAGVRRLPVKESKWLLDNAWSVIKDSPFMCRKEWVKIISGTEEAYFGWIALNYHSGILGVRPRKATYGALDLGGSSLQVTFESDQQLNSETSLYVRIGSVNHHLTAYSLSGYGLNEAFDKSVVRLFKKEFGSANADIADKKIELKHPCLQSGYKEQYVCSHCSSGNGDGSLTVKGKQQGKQGGSGTPLVLVGAPNWQQCSALTKVVVNLSEWSNLSTGLDCGVQPCALRDNLPRPYGHFYVISGFYVVYRFFNLTSEATLDDVLKKGKEFCEKEWDVAKKSVAPQPFIDQYCFRAPYIASLLREGLHINDNQITVGSGSITWTLGVALLEAGKAYSTRFGIRDLELLQMKINPLILMPILLLSFILLLCALSCVGNWMPRIFRRQYLPIFRHNSVSSASVLNIPSPFRFKRWSPMNAGDGRIKTPLSPTIAGSQGSPFALGHGFGDNSDGIQLMESSLYPSASGVSHSFSSNSLGQMQFDSGAFRSPHRSQMRLQSRRSQSREDLNSSVAEAHLVKV. 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01146 1171 Pfam GDA1/CD39 (nucleoside phosphatase) family 556 983 IPR000407 GO:0016787
Seca10g01146 1171 Gene3D Exopolyphosphatase. Domain 2 694 971 - -
Seca10g01146 1171 Gene3D - 552 693 - -
Seca10g01146 1171 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 398 - -
Seca10g01146 1171 SUPERFAMILY Multidrug resistance efflux transporter EmrE 127 210 - -
Seca10g01146 1171 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 525 988 IPR000407 GO:0016787
Seca10g01146 1171 MobiDBLite consensus disorder prediction 1134 1171 - -
Seca10g01146 1171 Pfam EamA-like transporter family 112 209 IPR000620 GO:0016020
Seca10g01146 1171 Pfam EamA-like transporter family 256 393 IPR000620 GO:0016020
Seca10g01146 1171 MobiDBLite consensus disorder prediction 1134 1148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01146 Seca-Chr10 11051058 11058894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01146 443 1171 Nodulin-like Gene Family AT4G19180 58.421 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01146 - - adu:107487370 1080.86