Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01141 ATGGCCATTGATATGCCTCTATCTGGGGCTCAAAGTGTGAGGACAAACAGATCTTCCTTTGGCTCTAGCAATGGCAATGGGGATACCCCTCTACATAACTATGCCACTGTTAGCAATGGTGATGACTATGACAGCGATGGTGGCAGTTTCGCACCACCCACACCAACAACTCTATCAATGGCTATTCCAGCAGATCTTGCTGGAGCTGTACCTTTGATTAATAGATTCCAGGTGGAAGGATTTTTAAAATTGATGCAAAAACAAATTCATTCTGCTGGGAAACGAGGATTTTTTTCTAAAAGATCTGTGGGCCCTCAAGTTCGAGAGAAACTTACATTTGAAGACATGCTTTCTTTCCAAAAGGATCCAATACCAACATCATTGCTTAAGCTGAATAGCGATTTAGCAAGCCGAGCGACAAAATTATTCCAGATAATTTTGAAATATATTGGAGTTGATTCATCTGATAATGTAACTCCAATGAGCTTAGAGGAACGAGTTGAGCTTGTAGGTAAACTATACAAGCAAAGTTTAAAACGTTCAGAACTCAGAGATGAACTTTTTGTCCAGATATCAAAACAAACAAGAAACAACCCTGAGAGGGAATACTTGATTAAAGCATGGGAGCTAATGTATTTATGTGCATCGTGTATGCCTCCTAGTAAAGACATTGGAGGATACCTGTCAGAATATATTCATAACGTGGCACATGGTGTGACTGCTGATCCTGAGATCCGAGCCCTTGCATTAAATACGTTAAATGCTTTGAAGCGCTCTGTCAAGGCTGGTCCTAGGCATATAATACCTGGGCCTATCGAGATTGAAGCTCTATTGACTGGGAGAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAGGAAATTACATATGACATGTCAACAACAGTTGCTGAAGCTGTTGAGGAACTTGCAGGAATAATTAAACTGTCAACATACTCCAGCTTTAGCCTCTTTGAATGTCGTAAAGTTGTTACCAGCTCCAAATCACCTGATACTGGGAATGGCACGTCTTTTTGCACTGCTTGCTTGGAATACATTGGGTTAGATGATAATAAACATATTGGGGATCTCCTCGCGGAATTTAAGGCGGTGAAAGATCGAAGTAAGGGAGAAATTTTGCAATGTAAACTGATATTCAAGAAAAAGTTATTTCGTGAATCAGATGAAGCTGTGACTGATCCAATGTTTATGCAGCTGTCCTATGTACAATTGCAACATGATTATATTTTGGGTAATTATCCTATTGGAAGGGATGATGCTTCCAAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCGCTGACTGGAATTCATTTCTGGAGAGATTTCTGCCTAGACAAATTGCAATGACTCGAGCGAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGAGCATGTGACAAAAGATGATGCAAGACAACAATTTCTGCATATATTGAAAACACTTCCTTATGGGTTTTCTGTTTTTTTCAATGTTCGCAAAATTGATGATCCTATCGGACTCCTGCCTGGACGAATAATATTAGGAATTAACAAGAGAGGGGTTCATTTTTTTCGTCCCATTCCCAAGGAGTATTTGCACTCAGCTGAGTTGAGAGACATCATGCAATTTGGAAGCAGTAATACTGCAGTTTTTTTTAAAATGCGAGTTGCAGGTGTTCTGCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGCCGGTATTCCAAAACACGATCTTCTACCAGTAGTTCTTTGAGTGAAGAAGTTTCTAATAATTTTAAGCCTCCGAATTTGGAATTATATGAAAAACGTGTTCAAGAGTTATCAAAAGTTGCTGAAGAGTCTCAAAGAAATGCTGAGCAATTGCTGGAAAAATTGCATGAGAAGCAAAAACAAGAAGAGGAAATGCTACAAGAATTAGAGGGCTTGAAAGATTCTTTAAAAGCTGATAAGCATAGTCTTGCAGAAATTACAAATGAACGAGATAGGCTTAAATCATTATGCAATGAAAAAGATAAGGCACTTCAGGCTAAAATTCTGGAGAAAAGAAGCATGGAGGAAAAGATGGCCAAGTTGAGTAATTTGGTGATGGAGAGCACTGCCAAAAAAGACCCCATTGGTGCAAATAACGAAGTGTTACAAAAGCTTGAAGATGACCTAAAACTTTGTAAAGATGAGCATCGTTTAGCTGAAGAGACAATCAAAAGCTTGACAAACGAAAAGTTAATTTTGGCACAAAAGCTATCTGAGCTTGAGGAGAAGAAAGCTGAAGAGATTAGTTCTCTTCAAAGGAAACTTGACCAAGAATGCAAAGCTCTGAACTCTCAAGTCTATGACCTTGAAAGAAAACTGAATATGTTTAGACAAGAATTAGTTGCAGCTGAGTCTACACTTTCAGTAAAGGACTCTGAATTGGTTGCATTGAAGAACAATTTAAAAGAACTAGAAGAATTAAGAGAAATGAAAGAGGACATTGATAGAAAAAATGAACAAACAGCTTCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAATTGGAAATGCTTTATAAGGAGGAGCAGGTTCTCAGGAAGCGATATTTTAATACCATAGAAGATATGAAAGGCAAAATAAGAGTTTACTGTCGGCTAAGACCTCTTGGTGAAAAAGAGATTGCTGACAAAGAAAGAGATGTTCTTACTACTGTAGATGAGTTTACAGTTGACCATCCATGGAAAGATGACAAACCAAAACAACACATATATGATCGTGTGTTTAATGGTGATGCCACTCAAGAAGATGTATTTGAGGATACAAGGTACTTGGTGCAATCTGCTGTAGACGGTTATAACGTTTGTATATTTGCGTATGGTCAAACTGGCTCTGGAAAGACATTTACAATTTATGGATCTGAAAACAATCCTGGCCTTACCCCGCGTGCTACTGCAGAACTTTTCAGAATTTTAAGGAGAGATGGTAACAAGTTTTCTTTTTCATTGAAGGCATACATGTTGGAATTATATCAAGATACACTTGTAGATCTTCTATTACCTAAGAATGCAAAGCGATTAAAATTGGAGATTAAAAAGGATTTAAAGGGAATGGTAGCTGTAGAAAACGTAACAGTTGTGTCAATTTCTACCATGGAGGAATTGAATAGCATAATACGGAGGGGGTCTGATCGACGACATACATCAGGGACACAAATGAATGAAGAAAGCTCTAGATCTCATCTTATACTATCCATTGTTATTGAAAGTATCAACCTTCAAAGTCAATCAGCTGCAAGGGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTAAAAAAGTCAGGCTCTGAAGGTAGTCAACTCAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCACTTGGAGATGTTATTAGTGCTTTATCTTCTGGTGGCCAACACATTCCTTATAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGGGGTAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCAGCAGAGTCAAGCTTGGATGAGACACACAACTCCCTTATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAACTAAACTGAAGAAATTGGTTGCATATTGGAAGGAGCAAGCAGGTAGGAGAGGGGAGGATGAAGATTTAGAAGAAATCCAAGAAATACGGCCAACTAAAGAAAGGAGTGATGGGCGGCATTCTATGTAG 3834 0.3845 MAIDMPLSGAQSVRTNRSSFGSSNGNGDTPLHNYATVSNGDDYDSDGGSFAPPTPTTLSMAIPADLAGAVPLINRFQVEGFLKLMQKQIHSAGKRGFFSKRSVGPQVREKLTFEDMLSFQKDPIPTSLLKLNSDLASRATKLFQIILKYIGVDSSDNVTPMSLEERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPEREYLIKAWELMYLCASCMPPSKDIGGYLSEYIHNVAHGVTADPEIRALALNTLNALKRSVKAGPRHIIPGPIEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVAEAVEELAGIIKLSTYSSFSLFECRKVVTSSKSPDTGNGTSFCTACLEYIGLDDNKHIGDLLAEFKAVKDRSKGEILQCKLIFKKKLFRESDEAVTDPMFMQLSYVQLQHDYILGNYPIGRDDASKLSALQILAEIGFVRRPESCADWNSFLERFLPRQIAMTRAKREWELDILSCYHSLEHVTKDDARQQFLHILKTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSTSSSLSEEVSNNFKPPNLELYEKRVQELSKVAEESQRNAEQLLEKLHEKQKQEEEMLQELEGLKDSLKADKHSLAEITNERDRLKSLCNEKDKALQAKILEKRSMEEKMAKLSNLVMESTAKKDPIGANNEVLQKLEDDLKLCKDEHRLAEETIKSLTNEKLILAQKLSELEEKKAEEISSLQRKLDQECKALNSQVYDLERKLNMFRQELVAAESTLSVKDSELVALKNNLKELEELREMKEDIDRKNEQTASILKMQGAQLAELEMLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLGEKEIADKERDVLTTVDEFTVDHPWKDDKPKQHIYDRVFNGDATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILRRDGNKFSFSLKAYMLELYQDTLVDLLLPKNAKRLKLEIKKDLKGMVAVENVTVVSISTMEELNSIIRRGSDRRHTSGTQMNEESSRSHLILSIVIESINLQSQSAARGKLSFVDLAGSERVKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETHNSLMYASRVRSIVNDPSKNVSSKEITKLKKLVAYWKEQAGRRGEDEDLEEIQEIRPTKERSDGRHSM. 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01141 1277 SUPERFAMILY Prismane protein-like 844 905 IPR011254 GO:0003824|GO:0016491
Seca10g01141 1277 Coils Coil 829 866 - -
Seca10g01141 1277 Gene3D - 282 394 - -
Seca10g01141 1277 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 393 - -
Seca10g01141 1277 FunFam Kinesin-like calmodulin-binding protein 845 1224 - -
Seca10g01141 1277 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Seca10g01141 1277 ProSiteProfiles FERM domain profile. 283 605 IPR000299 GO:0005856
Seca10g01141 1277 SMART kinesin_4 899 1230 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01141 1277 SUPERFAMILY Second domain of FERM 389 506 IPR035963 -
Seca10g01141 1277 MobiDBLite consensus disorder prediction 1 34 - -
Seca10g01141 1277 Gene3D MyTH4 domain 98 280 IPR038185 -
Seca10g01141 1277 Pfam Kinesin motor domain 907 1222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01141 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 1250 IPR027417 -
Seca10g01141 1277 Gene3D - 1225 1273 - -
Seca10g01141 1277 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Seca10g01141 1277 Gene3D Kinesin motor domain 888 1224 IPR036961 -
Seca10g01141 1277 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Seca10g01141 1277 ProSitePatterns Kinesin motor domain signature. 1122 1133 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca10g01141 1277 Gene3D - 509 618 IPR011993 -
Seca10g01141 1277 SMART B41_5 279 511 IPR019749 -
Seca10g01141 1277 CDD KISc_C_terminal 899 1224 - -
Seca10g01141 1277 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Seca10g01141 1277 CDD FERM_C_KCBP 509 605 - -
Seca10g01141 1277 Coils Coil 629 733 - -
Seca10g01141 1277 PANTHER MYOSIN VII, XV 6 907 - -
Seca10g01141 1277 FunFam Kinesin-like calmodulin binding protein 394 505 - -
Seca10g01141 1277 MobiDBLite consensus disorder prediction 9 34 - -
Seca10g01141 1277 MobiDBLite consensus disorder prediction 1249 1277 - -
Seca10g01141 1277 Coils Coil 744 821 - -
Seca10g01141 1277 PRINTS Kinesin heavy chain signature 1172 1193 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01141 1277 PRINTS Kinesin heavy chain signature 1123 1141 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01141 1277 PRINTS Kinesin heavy chain signature 1092 1109 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01141 1277 PRINTS Kinesin heavy chain signature 973 994 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01141 1277 Pfam FERM central domain 397 511 IPR019748 -
Seca10g01141 1277 SUPERFAMILY PH domain-like 511 599 - -
Seca10g01141 1277 ProSiteProfiles Kinesin motor domain profile. 901 1222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca10g01141 1277 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 509 618 - -
Seca10g01141 1277 Gene3D - 403 504 IPR014352 -
Seca10g01141 1277 CDD FERM_B-lobe 406 504 IPR019748 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01141 Seca-Chr10 11006071 11016686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01141 34 1272 Calmodulin-binding Proteins AT5G65930 72.196 0.0 1818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01141 - - gmx:100782701 2101.25