Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01137 ATGGGAAGCAAAACTGGAGAAGACCCAGATGATATTCTGAAGCACAACCATCAAATGCTTGCAGCTGTTCACAGAGGAAGATATGTGATTTTCCCTTTTGTTCTCACTGGGAATGTTTTTAACAGTATTGAGCAAGCCCAAGTTTCCCATATTTATAGCTACAGACATGGTTTCAGAGGCTTTGCAGCCAAGCTGACTGATGAACAGGCTTACCAAATTTCAAAAATGCCTGGAGTGGTTTCTGTTTTTCCCAATTCCAAAAGGAAGTTGCACACCACTCATTCATGGGACTTCATAGGACTTCTGGGCGATGAAACCATGGAGATTCCCGGGTACTCCACCAAAAACCAAGAAAATATCATCATTGGTTTCATTGATACGGGTGAGCAGTCTTACTCTTACAGAATTTGGCCTGAATCCCCAAGCTTTAGTGACATTGACATGCCACCAGTGCCACACGGATGGAAGGGCCATTGTCAATTAGGAGAAGCATTCAATACTTCATCTTGTAACAGGAAAGTGATAGGAGCTAGATACTATATGGGTGGATATGAAGCAGAAGAAGGGTCAGGCAGAAAAGTCTCTTTCAGATCTGCAAGGGATAGCTCTGGTCATGGGAGCCATACAGCTTCCACAGCAGCAGGGCGCTATGTGGCAAACATGAATTATAAGGGGCTAGCAGCTGGAGGGGCTAGGGGAGGTGCACCTATGTCTAGGATTGCTGTGTATAAAGCATGTTGGGATTCAGGCTGCTATGATGTGGATTTGCTAGCTGCCTTTGATGATGCTATAAGAGATGGTGTTCACATTATATCTTTATCTCTGGGCCCTGGAGCTCCACAAGGTGACTATTTCAATGATGCCATATCTGTGGGGTCATTCCATGCAGTTAGACGTGGGGTGCTGGTGGTAGCATCAGTTGGGAATGAAGGAAGTCCTGGTTCTGCTACCAACCTTGCACCATGGATTATCACTGTTGCTGCTAGCTCAACAGACAGGGATTTCACCTCTGATATCATATTAGGAAAGGGTGTTAAGATCACGGGTGAGAGTCTCAGTCCCTTGCAAATGAATGCCTCCAGAAGAATAATTCCTGCATCTGAAGCCTTTGCAGGATATTTTACTCCTTATCAATCCAGTTACTGTTTAGATAGTTCCCTAAATAAGACCAAGGCCAAAGGGAAGGTTCTGGTGTGTCGACATGCAGAGAGTTCTACGGAGTCAAAGTTGGTAAAAAGCAAGACAGTGAAAGAGGCAGGTGGAGTGGGGATGATACTTATTGATGAGGCAGATCTAGGTGTTGCCTCCCCATTTGTGATACCCTCAGCTGTTGTTGCAAGTAAAACAGGAGAAAAGATTCTATCCTATATCAATGGCACACGTATGCCTATGTCAAGGATTTTCAGAGCCAAAACAGTACTAGGAATCCAGCCAGCACCCCGTGCAGCAGCATTTTCTTCCAAAGGCCCCAATACCTTAACCCCAGAAATTTTGAAGCCTGATATTACAGCTCCTGGATTAAACATCCTCGCAGCATGGTCTCCAGCTGCCGAAGGAAACATGAAGTTCAATATTCTATCAGGAACTTCTATGGCGTGTCCTCATGTAACTGGAATTGCAACCTTGGTCAAAGCTGTGTATCCTTCATGGTCTCCGTCTGCTATCAAATCTGCCATCATGACAACTGCCACAGTTCTGGATAAGCAACACCAACCCATTAAAGCAGATCCTGATAGAAGAAAGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTGGATCCTGGTCTTGTCTATGATTCAGAGCCAGAAGATTTTGTTGCGTTCCTCTGTTCACTTGGTTATGATGAGAGTTCACTCCATCTTGTTACAGGAGATAACAGCACATGTGGTGGCGCATTCAAAACACCATCTGACCTTAACTATCCATCTATTGCAGTGCCTAATCTTGAAGACAGCTTTTCAGTAACCCGAGTTGTGACTAATGTTGGAGAAGCAAAAAGTATATATAAAGCTGTAGTGTTGCCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAACCGGTTAGTCTTCACAAGAATAGGACAGAAAATCAAGTTCACTGTGAATTTCAAAGTGGCTGGTCCTTCTAAGGGCTATGCATTTGGGTTCTTGTCATGGAGAAACAGAAGATCACAGGTCACCAGTCCTTTAGTTGTCCGGGTTGAACCAGCAAGTGTTGGGTTGGTCAGATAG 2250 0.4444 MGSKTGEDPDDILKHNHQMLAAVHRGRYVIFPFVLTGNVFNSIEQAQVSHIYSYRHGFRGFAAKLTDEQAYQISKMPGVVSVFPNSKRKLHTTHSWDFIGLLGDETMEIPGYSTKNQENIIIGFIDTGEQSYSYRIWPESPSFSDIDMPPVPHGWKGHCQLGEAFNTSSCNRKVIGARYYMGGYEAEEGSGRKVSFRSARDSSGHGSHTASTAAGRYVANMNYKGLAAGGARGGAPMSRIAVYKACWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPGAPQGDYFNDAISVGSFHAVRRGVLVVASVGNEGSPGSATNLAPWIITVAASSTDRDFTSDIILGKGVKITGESLSPLQMNASRRIIPASEAFAGYFTPYQSSYCLDSSLNKTKAKGKVLVCRHAESSTESKLVKSKTVKEAGGVGMILIDEADLGVASPFVIPSAVVASKTGEKILSYINGTRMPMSRIFRAKTVLGIQPAPRAAAFSSKGPNTLTPEILKPDITAPGLNILAAWSPAAEGNMKFNILSGTSMACPHVTGIATLVKAVYPSWSPSAIKSAIMTTATVLDKQHQPIKADPDRRKANAFDYGSGFVNPARVLDPGLVYDSEPEDFVAFLCSLGYDESSLHLVTGDNSTCGGAFKTPSDLNYPSIAVPNLEDSFSVTRVVTNVGEAKSIYKAVVLPPAGVNVTVVPNRLVFTRIGQKIKFTVNFKVAGPSKGYAFGFLSWRNRRSQVTSPLVVRVEPASVGLVR. 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01137 749 SUPERFAMILY Subtilisin-like 90 602 IPR036852 GO:0004252|GO:0006508
Seca10g01137 749 Pfam PA domain 367 453 IPR003137 -
Seca10g01137 749 Pfam Peptidase inhibitor I9 26 91 IPR010259 -
Seca10g01137 749 CDD PA_subtilisin_like 338 467 - -
Seca10g01137 749 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Seca10g01137 749 FunFam Subtilisin-like protease SBT1.5 615 741 - -
Seca10g01137 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 91 IPR037045 -
Seca10g01137 749 Gene3D - 332 474 - -
Seca10g01137 749 CDD Peptidases_S8_3 89 564 IPR034197 -
Seca10g01137 749 ProSiteProfiles Serine proteases, subtilase domain profile. 95 598 - -
Seca10g01137 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 49 738 IPR045051 -
Seca10g01137 749 FunFam Subtilisin-like protease SBT1.5 119 341 - -
Seca10g01137 749 Gene3D - 615 740 - -
Seca10g01137 749 Gene3D Peptidase S8/S53 domain 119 611 IPR036852 GO:0004252|GO:0006508
Seca10g01137 749 PRINTS Subtilisin serine protease family (S8) signature 117 136 IPR015500 -
Seca10g01137 749 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Seca10g01137 749 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Seca10g01137 749 Pfam Fibronectin type-III domain 644 738 IPR041469 -
Seca10g01137 749 Pfam Subtilase family 188 566 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01137 Seca-Chr10 10986361 10990724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01137 22 740 Subtilisin-like Serine Gene Family AT2G04160 43.683 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01137 - - gmx:100780538 1261.9