Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01121 ATGGCCATGGAGGGAGGAAGAATCTGCGAGGAGTTAACACCTAGGTATTACGCCCTTTGCGCCATTGGAGGAATGCTCAGTGCTGGCACCACCCATCTTGCCACCACTCCTCTTGACGTCTTGAAAGTCAACATGCAGGTGCACCCAATTAAGTATTATAGCATTCAATCATGCTTTACTACTTTGTTGAGGGAACAAGGGCCTTCTGTCCTCTGGAGAGGTTGGACAGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGATGCAGATTTGGTCTCTATGAATATTTTAAGGGGGTTTATTCAAATGTATTGGTAGACCAGAACAGGAGTCTTGTTTTCTTTCTTAGTAGTGCATCTGCTGAAGTATTTGCCAATTTAGCTCTATGCCCGTTTGAAGCTATTAAAGTGAGGGTTCAAGCACAGCCCTGTTTTGCTAAAGGCTTGTTTGATGGCTTTCCAAAGTTATATGCATCAGAAGGCACACGAGGATTCTACCGTGGACTTGTTCCGCTTTTGGGTCGAAACCTTCCATTTTCCATGGTCATGTTCTCAACATTTGAGCATTCGGTTGATTTTTTGTATCGTAATGTTGTCAAAAGAAAAAAGGAGGAATGTTCAAAAGCTCAACAGCTTGGTGTGACATGTCTAGCTGGGTATGCAGCTGGATCTGTTGGTAGCTTCGTTTCTAATCCTGCTGACAATATTGTAGCTTCTCTTTATAACAAAAAGGCTGATAGTCTTGTGCTGGCTATCAGAAACATTGGGCTAGCCAACCTGTTTACCAGGAGTCTTCCTATTAGAATGATGCTGGTTGGTCCTTCTATAACTTTGCAATGGTTTTTCTACGACACTATCAAAGTCTTAGGTGGAATGCCAACTAGTGGTGAAGTTGCAACAGACTTGAGAGGAGATGGCCCAGGCTAG 924 0.4372 MAMEGGRICEELTPRYYALCAIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSIQSCFTTLLREQGPSVLWRGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQNRSLVFFLSSASAEVFANLALCPFEAIKVRVQAQPCFAKGLFDGFPKLYASEGTRGFYRGLVPLLGRNLPFSMVMFSTFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYAAGSVGSFVSNPADNIVASLYNKKADSLVLAIRNIGLANLFTRSLPIRMMLVGPSITLQWFFYDTIKVLGGMPTSGEVATDLRGDGPG. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01121 307 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Seca10g01121 307 Pfam Mitochondrial carrier protein 20 101 IPR018108 -
Seca10g01121 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Seca10g01121 307 SUPERFAMILY Mitochondrial carrier 16 284 IPR023395 -
Seca10g01121 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Seca10g01121 307 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 18 289 - -
Seca10g01121 307 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 8 298 IPR044677 GO:0005315|GO:1990547
Seca10g01121 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Seca10g01121 307 Gene3D Mitochondrial carrier domain 18 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01121 Seca-Chr10 10789067 10793850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01121 1 297 Chloroplast and Mitochondria Gene Families AT2G17270 67.785 1.39e-155 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01121 K15102 - gmx:100788561 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01121 10 10789067 10793850 Seca10g01121 10 10789067 10793850 ECH