Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01091 ATGCATGGTGGCATGAATTTCTTTACAGGTTCAAGGAGTACTAATAATAATGACACTAAGAAGAACGTGGCTATGGCATCATGTGGTAGTAGTGTTCAAGTTTGGGAGATGGGAAGTGAAGGAACAACCACAAGTGGGAAGCTTCTAGAAATTACTCCAAACTTGAAGGTGTTTAGTTTTGCAGATTTGAAAGCAGCCACCAAAGGTTTTAAATCAGATGCATTGCTTGGAGAAGGTGGTTTTGGTAAAGTATACAAAGGTTGGTTGGATGAGAAGACACTATGTCCTACCAAAGCTGGTTCAGGAATGATGGTAGCCATAAAGAAATTGAAACCTGAAAGTATGCAAGGGGTTCAAGAGTGGCAGTCAGAAATAAACTTTTTAGGAAGTGTTTCTCACCCCAACTTGGTCAAGCTATTGGGTTACTGTAGGGAAGATGACGAATTTCTTCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTGGAGAATCACCTCTTCAGAGGAAATATTAACATTGAATCACTTTCTTGGAACACTCGACTCAAGATAGCTATTGGTGCAGCTCGGGGCTTGGCTTTCTTGCACACATCAGAAAAGCAAGTTATATACAGAGATTTCAAGGCCTCCAATATACTACTTGATGGGAATTTTAATGCAAAAATTTCAGATTTTGGCTTAGCTAAATTTGGGCCTTCTGGGGGAGATTCACATGTGACTACCAGGATCATGGGCACATTTGGCTATGCTGCCCCAGAGTACATTGCAACAGGTGATGACTATATATATCTACACACATAA 798 0.406 MHGGMNFFTGSRSTNNNDTKKNVAMASCGSSVQVWEMGSEGTTTSGKLLEITPNLKVFSFADLKAATKGFKSDALLGEGGFGKVYKGWLDEKTLCPTKAGSGMMVAIKKLKPESMQGVQEWQSEINFLGSVSHPNLVKLLGYCREDDEFLLVYEFMPKGSLENHLFRGNINIESLSWNTRLKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDGNFNAKISDFGLAKFGPSGGDSHVTTRIMGTFGYAAPEYIATGDDYIYLHT. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01091 265 FunFam Serine/threonine-protein kinase BIK1 38 155 - -
Seca10g01091 265 Pfam Protein kinase domain 71 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g01091 265 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Seca10g01091 265 Gene3D Transferase(Phosphotransferase) domain 1 156 262 - -
Seca10g01091 265 SUPERFAMILY Protein kinase-like (PK-like) 47 257 IPR011009 -
Seca10g01091 265 ProSiteProfiles Protein kinase domain profile. 70 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g01091 265 FunFam Os07g0541700 protein 156 245 - -
Seca10g01091 265 PANTHER OS01G0588500 PROTEIN-RELATED 25 258 - -
Seca10g01091 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Seca10g01091 265 Gene3D Phosphorylase Kinase; domain 1 54 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01091 Seca-Chr10 10517178 10523124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01091 50 257 Glycoside Hydrolase AT3G07070 52.607 3.04e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca10g01091 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01091 - - gmx:100794193 372.089