Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01061 ATGAAAGCAATGATAGCAACGTCGTTCGATTTCTCCGCCGTCTGCTTCCATTCATGCTCTCCAAATCTACGCCAGAGCAGGAGATGGAGCAGCTATTCGTTTCTAAAATCCCCCAACTTTCACAACGGACGGAGGAGCGTCACTGTTCAACCCAACTTTCCAAACTTCCGAATGGAAACTGCTTTGAAGGGGAACTTGGAGACTATTGGAGTCCCAACTTCGGTACCAGTGCGTGTAGCGCATGAGCTTCTTCTAGCTGGGCACAAGTATTTGGATGTGAGGACCCCAGAAGAGTTCAATGCTGGACACGCTCCTGGCGCAATTAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACAAAGAACCGCAACTTTGTTAAAGAGGTCTCCTCACATTTTAGGAAAGATGATGAAATTATTGTTGGGTGTCAGCTTGGTAAAAGGTCTATGATGGCTGCTAGTGACTTGTTAGCTGCTGGGTTCACTGGAATCACAGACATAGCTGGTGGTTATGCTGCTTGGACCCAAAATGGTCTTCCAACAGAATAG 552 0.4674 MKAMIATSFDFSAVCFHSCSPNLRQSRRWSSYSFLKSPNFHNGRRSVTVQPNFPNFRMETALKGNLETIGVPTSVPVRVAHELLLAGHKYLDVRTPEEFNAGHAPGAINIPYMFRVGSGMTKNRNFVKEVSSHFRKDDEIIVGCQLGKRSMMAASDLLAAGFTGITDIAGGYAAWTQNGLPTE. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01061 183 CDD RHOD 91 175 - -
Seca10g01061 183 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 70 182 IPR036873 -
Seca10g01061 183 Pfam Rhodanese-like domain 90 177 IPR001763 -
Seca10g01061 183 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 7 183 - -
Seca10g01061 183 Gene3D - 62 183 IPR036873 -
Seca10g01061 183 ProSiteProfiles Rhodanese domain profile. 84 183 IPR001763 -
Seca10g01061 183 SMART rhod_4 74 181 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01061 Seca-Chr10 10184933 10188795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01061 74 181 Sulfurtransferasese or Rhodanese AT5G66170 46.364 5.99e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01061 - - aprc:113868825 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01061 10 10184933 10188795 Seca12g02943 12 56126966 56128981 PCT