Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01054 ATGGGGGATACCGGTGTTGACGGAAACGGTAACGGCGACGGCGCCGTTTATCTACATGGCGACCTTGATTTGACAATCGTCAAGGCTCGCCGTTTGCCTAACATGGACATGTTCTCCGAGCGTGTCCGCCGTTGCGTCACCGCCTGTGATACAATCAAATTCCACTCATCAGACACCGCTTCAGACGGGAGCGAAAGTGGGACCCACCACCGCCACGTCAAGAAGATTATCACAAGCGACCCGTACGTCACCGTTTCGGTGCCGCAGGCAACCGTCGCTCGCACGCGCGTTCTCAAGAATTCTCAGAACCCTGTCTGGAACGAACACTTCAACATTCCCCTTGCTCACCGCGTCGTCGATTTGGAATTCCGCGTCAAGGACGACGACGTTTTCGGCGCTCAGATCATGGGGACTGTTAAGATTCCGGCGCGGAGGATTCTCTCCGGCGAGTTTATTTCCGGCTGGTTCCCGATTCTCGGGTCCTCCGGCAAGCCGCTGAAGCCGGACACCGCGTTGTGCATCGAGATGAAGTTCACGCCGGTGGAAGAGAATCCGCTTTACCAGCGAGGCATCGCGGCGGATCCCGAGCATAAGGGCGTGAGGCACACGTATTTTCCGGTGAGGAAGGGAAGCTCGGTGAGGTTGTACCAAGATGCACAGTGCCCTAATGGGATGCTACCGGAGATTCAACTCGAGGGTGGGAAGGTTTATAGGCACGAGAAGTGCTGGGAAGATATTTGCTATGCTATTTCAGAAGCTCATCACATGGTGTATCTGGTGGGTTGGTCGATCTACCACAAGGTGAAGCTTGTTAGGGAACCCACTAAGCCTTTGCCACGAGGTGGAGATTTGACGCTTGGTGAGTTACTCAAGTACAAGTCTGAAGAAGGGGTGCGAATTTTGTTGCTGGTTTGGGATGATAAGACTTCCCATGATAAGGTCTTCTTCAAGACGGCTGGGGTAATGCAGACTCATGATGAGGAAACAAGGAAGTTTTTCAAACATTCTTCAGTTATGTGTGTTTTGGCGCCTCGCTATGCCAGCAGCAAGATGAGCCTCTTGAAGCAACAGGCAAGTATTGTGGAGTCAAATGTGAAATGCCCTGTGTTTTGTGGCGTAGGCTCTAAATCTTGGGTTGTTGGGACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAGGCTCCTGGTAATAACCGAAAGATAACTGCTTTTATAGGAGGTCTTGATTTATGTGATGGTCGGTATGACACACCTGAGCATCGACTTTTTCGTGACCTTGACACTGTATTTTCTGGTGATTTCCACAATCCCACATTTCCTTCTGGAACAAGGGCCCCTAGACAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATATTCTTATTAATTTTGAGCAGCGATGGAGAAAAGCAACTAAGTGGAAAGAGTTTGCAATTATTTTTAAAAAGTCTTCTCATTGGAAGGATGATGCTTTGTTAAAAATAGAACGCATCTCATGGATATTAAGTCCTTCCCTTCCTTCCCTTCCTTCCTCAAAGGAAAAGGAAAATTATACAATTGTTCCTGGGGATGACCCTTTAGTGTGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCCTGAAAGGATTTCCCAAACGTGTTGATATTGCTCTATCCCAGCATCTTATCTGTGCTAAAGATTTGGTTATAGACAAAAGCATTCAAACGGGATACATTCAAGCGATCAGATCTGCTCAACATTTTATTTATATTGAAAACCAATACTTTATCGGATCATCATATGCATGGCCAGGATACAAAGACGCAGGGGCTGATAATCTCATCCCAATGGAATTGGCACTGAAAATTGTTAATAAAATCAGAGCTAAGGAGAGATTTGCTGTCTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAAATCTGGGGCTATGCAAGAAATCCTCTTTTGGCAGAGCCAGACAATGCAAATGATGTACGATGTTGTTGCTAGAGAATTGAAATCAATGCAACTTGATGATGTACACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAACAGTTTAATGAAGAAAGCTCAAGCTCAAATGGTGCACCGGTCTCTGGAGCATATAAATATCGCCGATTTATGATTTATGTGCATGCCAAGGGGATGATCATTGATGATGAGTATGTTATAGTGGGGTCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTGCGTATCAACCCCATTACACATGGTCTGCCAGGAAAAGACATCCACGTGGCCAGATTTATGGTTACAGAATGTCACTTTGGGGAGAACATCTTGGCATGTTAGAAGAAACTTTTGAGGAACCACAGACATTGGAGTGTGTGCGTAAAGTGAATGCAATTGCAGACAGTAATTGGAATAAATTCGCTTCTGAAGATTTCTCACTGTTGCAGGGACATCTTCTTAAGTATCCTGTACAGGTAGATTCCGATGGGAAGATCAGCTCCCTACCTGGATGTGAGAATTTCCCAGATGCTGGAGGTAAGATATTGGGGAGTCACTCCACAACAATTCCAGATATCCTAACAACATAA 2667 0.4589 MGDTGVDGNGNGDGAVYLHGDLDLTIVKARRLPNMDMFSERVRRCVTACDTIKFHSSDTASDGSESGTHHRHVKKIITSDPYVTVSVPQATVARTRVLKNSQNPVWNEHFNIPLAHRVVDLEFRVKDDDVFGAQIMGTVKIPARRILSGEFISGWFPILGSSGKPLKPDTALCIEMKFTPVEENPLYQRGIAADPEHKGVRHTYFPVRKGSSVRLYQDAQCPNGMLPEIQLEGGKVYRHEKCWEDICYAISEAHHMVYLVGWSIYHKVKLVREPTKPLPRGGDLTLGELLKYKSEEGVRILLLVWDDKTSHDKVFFKTAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKMSLLKQQASIVESNVKCPVFCGVGSKSWVVGTVFTHHQKCVIVDTQAPGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFPSGTRAPRQPWHDLHCRIDGPAAYDILINFEQRWRKATKWKEFAIIFKKSSHWKDDALLKIERISWILSPSLPSLPSSKEKENYTIVPGDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKRVDIALSQHLICAKDLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPGYKDAGADNLIPMELALKIVNKIRAKERFAVYIVLPMWPEGDPKSGAMQEILFWQSQTMQMMYDVVARELKSMQLDDVHPQDYLNFYCLGNREQFNEESSSSNGAPVSGAYKYRRFMIYVHAKGMIIDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHYTWSARKRHPRGQIYGYRMSLWGEHLGMLEETFEEPQTLECVRKVNAIADSNWNKFASEDFSLLQGHLLKYPVQVDSDGKISSLPGCENFPDAGGKILGSHSTTIPDILTT. 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01054 888 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 382 417 IPR001736 GO:0003824
Seca10g01054 888 SUPERFAMILY Phospholipase D/nuclease 585 815 - -
Seca10g01054 888 Pfam PLD-like domain 592 770 IPR025202 -
Seca10g01054 888 Pfam Phospholipase D Active site motif 382 417 IPR001736 GO:0003824
Seca10g01054 888 Gene3D C2 domain 19 188 IPR035892 -
Seca10g01054 888 PIRSF PLD_plant 9 888 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Seca10g01054 888 SMART C2_3c 21 155 IPR000008 -
Seca10g01054 888 Gene3D Endonuclease Chain A 560 784 - -
Seca10g01054 888 Pfam C2 domain 20 158 IPR000008 -
Seca10g01054 888 SMART pld_4 382 417 IPR001736 GO:0003824
Seca10g01054 888 SMART pld_4 733 760 IPR001736 GO:0003824
Seca10g01054 888 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 181 IPR035892 -
Seca10g01054 888 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 733 760 IPR001736 GO:0003824
Seca10g01054 888 SUPERFAMILY Phospholipase D/nuclease 203 486 - -
Seca10g01054 888 ProSiteProfiles C2 domain profile. 1 156 IPR000008 -
Seca10g01054 888 Pfam Phospholipase D C terminal 807 877 IPR024632 -
Seca10g01054 888 Gene3D Endonuclease Chain A 229 502 - -
Seca10g01054 888 PANTHER PHOSPHOLIPASE D 15 879 IPR015679 -
Seca10g01054 888 CDD C2_plant_PLD 15 179 - -
Seca10g01054 888 FunFam Phospholipase D delta 233 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01054 Seca-Chr10 10118777 10130758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01054 13 724 Phospholipase D Gene Family (Wang group) AT4G35790 70.515 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01054 K01115 - gmx:100801787 1497.64