Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01043 ATGGCTTCGATTTTTTGTTACAACCATGGTTCTATGTGTATAACGGTGGTGTTGGTGTTGGTGTTGTTGATGAGTTTAGCTTCACAGAGGTGTCACGGTCTTCATTCATTTGGGTTTGACATTCACCATCGATTTTCGGATCCGGTGAAAGGGGTTTTGGGCATTGATGAGCTACCCGACAAGGGAACTCGTGAATACTATGTTGCTATGGCCAACAGAGATCGAATATTCCGGGGACGGGGTCTCGCCGGCGATCATCAAACGCCGTTAACTTTTGTCCCTGATAACGAGACCTATCAGATTGGTATCTTTGGATTCTTGCATTTTGCCAATGTTTCTGTTGGGACACCAGCTTCATCGTTTCTTGTAGCATTGGATACCGGGAGTGACTTGTTCTGGTTACCTTGCAATTGTACCAAATGTGTTCATACTATAAAGTTTTCAACCGGACAGTCGATTGATTTTAATATCTATGATATCAAAGGATCATCCACGAGTCAAAATGTTTTGTGCAATAGCAGCTTATGTGAGCATCAGAGTGAATGCCTTTCATCTGGTGGCTTTTGTCCATATCAAGTTAAGTATCTATCTAATGGTACTTCAACTACTGGCTTCTTGGTAGAGGATGTGTTGCACTTAATTACAGATGATGCTCAAACAAAAAATTCTGACACACGAGTTACTTTTGGTTGTGGCCAAGTTCAAACTGGTGCATTTTTGGAGGGGGCAGCTCCAAATGGTCTGTTTGGACTAGGAATGGGTAATGAATCTGTCCCAAGTGTCTTAGCCAATCAAGGGCTTACTTCAAATTCTTTTTCAATGTGTTTTGGATTTGATGGTTCTGGAAGAATCACATTTGGGGATGACAGCAGCTTGGTCCAAGGAAAAACACCATTCAACCTAAGGCCATTGCATTCAACCTACAATGTCACCATTACCCAAATTACTGTGGGAGGAAATGCTGCTGATGTTGAGTTCCATGCAATATTTGACTCTGGTACCTCATTTACATTGCTAAATGACCCGGCTTATACGCAGATTACTCGTGGTTTTAATTCAGCTATTAAACTACAACGGCATTCATCTTCTGATGGTGATCTTCCCTTTGAGTACTGTTATGACTTAAGTTCTAACCAGACTGTTGAAGTTCCCATTAATTTGACCATGAAAGGTGGAGACAATTATTTTGTTATGGCCCCAATAGTAACCATTACTGGTCAGCAGGATATTAAGTTGCTTTGTTTGGGCGTCTTGAAAAGTGACAACGTGAATATCATTGGACAGAACTTCATGACTGGTTACCGCATAGTCTTTGACCGCGAGAACATGATTCTGGGTTGGAAGGAATCTAACTGTTATGATGATGAACTCTCCAATTTACCTACTAACCGAACGCAAGCCCCTGCTGTTTCTCCTGCTATGGCTGTGAATCCCCAAGTAACATCAAACCAATCTAGCAAGTCACTGAGCTTAAACTACTATGAAAAGACATGCCCTGAATTGGAGTTCATTGTTGCCAAGGCAGTGAAGGATGCCAGTGCTAGGGACAAAACTGTTCCTGCAGCACTTCTGCGAATGCACTTCCATGACTGTTTCATTCGGGGGTGTGATGCCTCTGTGCTGCTAAATTCAAAAGGAAACAACAAGGCAGAAAAAGACGGACCACCAAATGTTTCTTTGCATGCCTTCTATGTCATTAATGCAGCAAAGAAAGCAGTAGAAGCTTCATGCCCTGGTGTAGTCTCTTGTGCTGATATCCTTGCTCTATCAGCAAGGGACGCAGTTTTTCTGTCTGGAGGACCTACTTGGGATGTCCCTAAAGGAAGAAAGGACGGAAGAACATCTAAGGCCAGTGAAACCATACAATTAACTGCGCCAACCTTCAACATATCACAACTGCAGAAGAGCTTCTCTCAAAGAGGATTGTCAATGGAAGACCTGGTAGCTCTGTCAGGAGGTCATACTTTAGGCTTTTCTCACTGCTCATCTTTCCGGAACAGAATCCATAACTTTGACACTACACATGATGTGGACCCTTCATTGAATCCATCATTTGCAGCAAAACTAAAATCAATTTGTCCACTAAAAAATCAGGCAAAAAATGCAGGCACTACTATGGACCCTTCTTCAACAACTTTCGATAATACGTATTACAAGTTGATCCTCCAACGGAAAGGGCTGTTTTCTTCTGATCAAGCTTTGCTTGATAACCCAAACACCAAGCATCTGGTTTCTAAGTTTGCCAACTCACAAAAGGCTTTTTATGAGGCTTTTGCGAAGTCCATGATCAAAATGAGTAGCATCAATGGTGGGCAAGAGATCAGGAAAGACTGCAGAGTGGTCAATTAG 2349 0.4227 MASIFCYNHGSMCITVVLVLVLLMSLASQRCHGLHSFGFDIHHRFSDPVKGVLGIDELPDKGTREYYVAMANRDRIFRGRGLAGDHQTPLTFVPDNETYQIGIFGFLHFANVSVGTPASSFLVALDTGSDLFWLPCNCTKCVHTIKFSTGQSIDFNIYDIKGSSTSQNVLCNSSLCEHQSECLSSGGFCPYQVKYLSNGTSTTGFLVEDVLHLITDDAQTKNSDTRVTFGCGQVQTGAFLEGAAPNGLFGLGMGNESVPSVLANQGLTSNSFSMCFGFDGSGRITFGDDSSLVQGKTPFNLRPLHSTYNVTITQITVGGNAADVEFHAIFDSGTSFTLLNDPAYTQITRGFNSAIKLQRHSSSDGDLPFEYCYDLSSNQTVEVPINLTMKGGDNYFVMAPIVTITGQQDIKLLCLGVLKSDNVNIIGQNFMTGYRIVFDRENMILGWKESNCYDDELSNLPTNRTQAPAVSPAMAVNPQVTSNQSSKSLSLNYYEKTCPELEFIVAKAVKDASARDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNVSLHAFYVINAAKKAVEASCPGVVSCADILALSARDAVFLSGGPTWDVPKGRKDGRTSKASETIQLTAPTFNISQLQKSFSQRGLSMEDLVALSGGHTLGFSHCSSFRNRIHNFDTTHDVDPSLNPSFAAKLKSICPLKNQAKNAGTTMDPSSTTFDNTYYKLILQRKGLFSSDQALLDNPNTKHLVSKFANSQKAFYEAFAKSMIKMSSINGGQEIRKDCRVVN. 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01043 782 FunFam Aspartyl protease family protein 1 291 454 - -
Seca10g01043 782 PRINTS Haem peroxidase superfamily signature 599 611 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Haem peroxidase superfamily signature 646 661 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Haem peroxidase superfamily signature 581 598 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Haem peroxidase superfamily signature 706 721 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Haem peroxidase superfamily signature 520 534 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 CDD pepsin_A_like_plant 108 452 IPR034161 -
Seca10g01043 782 SUPERFAMILY Heme-dependent peroxidases 489 782 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 ProSitePatterns Peroxidases proximal heme-ligand signature. 646 656 IPR019793 -
Seca10g01043 782 Gene3D Acid Proteases 95 288 IPR021109 -
Seca10g01043 782 ProSiteProfiles Peptidase family A1 domain profile. 108 448 IPR033121 -
Seca10g01043 782 PANTHER PEROXIDASE 25-RELATED 483 770 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 Gene3D Acid Proteases 290 453 IPR021109 -
Seca10g01043 782 Gene3D Peroxidase, domain 2 624 765 - -
Seca10g01043 782 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 123 134 IPR001969 GO:0004190|GO:0006508
Seca10g01043 782 Pfam Xylanase inhibitor C-terminal 308 448 IPR032799 -
Seca10g01043 782 Gene3D - 492 782 - -
Seca10g01043 782 FunFam Aspartyl protease family protein 1 95 288 - -
Seca10g01043 782 PRINTS Plant peroxidase signature 522 542 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 760 773 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 704 719 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 498 517 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 580 590 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 645 657 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 720 737 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 599 614 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 PRINTS Plant peroxidase signature 561 574 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 CDD secretory_peroxidase 489 781 IPR033905 GO:0004601|GO:0042744
Seca10g01043 782 FunFam Peroxidase 624 765 - -
Seca10g01043 782 Pfam Xylanase inhibitor N-terminal 109 288 IPR032861 -
Seca10g01043 782 SUPERFAMILY Acid proteases 103 453 IPR021109 -
Seca10g01043 782 ProSiteProfiles Plant heme peroxidase family profile. 488 782 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 Pfam Peroxidase 506 750 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g01043 782 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 328 339 IPR001969 GO:0004190|GO:0006508
Seca10g01043 782 FunFam Peroxidase 492 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01043 Seca-Chr10 9909605 9917983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01043 487 781 Peroxidase AT5G42180 69.257 7.15e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01043 - - gmx:100808171 765.763