Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01040 ATGGAAGAGGTGTGGAAAGACATCAATCTTGCTTCCTTGAATGACCAAAACAGTAGCCGGAGAACAAGCCGTTCCACCTTTGGAGGTGTAATCTTACAAGATTTTCTTGCACGACCATTTGGAATAGACACACCAAACAGCATGGTTTCTTCTTCTTCTGTTGCTTCAGAAAACAGTGCTTCTTCTTCTCTTTACTGTCCTGCTTCCCCTGCCCCACCTCTTGTCACTGCTCTCAGCTTAAGCTCTCGCCCTGATCATCATCACTTCCATTTTGATCCAAAGGGTAGTGTCCCTAATACTTCTTCCCATTTGGTTCAGCAACCCCACCACACTGCACCCTCAAAAGTTTCTTGTTTTACCAACCCAACAGCACTATTTGAAAGCCTTGCTTCTTCGCCCTGTTTTGGAAACAAGAGGTTCGCTGAACCTGCTGATTGTAACACTGGTGACAGGAGAAATAAGCGTATGATCAAGAATCGTGAGTCTGCTGCACGATCACGAGCTAGAAAACAGGAAAAGATTGCTTCTTTCTTTCATTCCATTAAAAAAAATGCTTACACGAATGAGCTTGAGGAAAAAGTTCAAGTCTTGACCGAAGAGAATACAAGACTCAAGAAACAGATACAAGAGTTGTGGGAAGCAGCAGATGGTCCACAAAAGAGGAAGAGTAGCCTATATAGAACATTAACAGCTCCATTTTGA 702 0.4316 MEEVWKDINLASLNDQNSSRRTSRSTFGGVILQDFLARPFGIDTPNSMVSSSSVASENSASSSLYCPASPAPPLVTALSLSSRPDHHHFHFDPKGSVPNTSSHLVQQPHHTAPSKVSCFTNPTALFESLASSPCFGNKRFAEPADCNTGDRRNKRMIKNRESAARSRARKQEKIASFFHSIKKNAYTNELEEKVQVLTEENTRLKKQIQELWEAADGPQKRKSSLYRTLTAPF. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01040 233 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 232 IPR043452 GO:0003700|GO:0045893
Seca10g01040 233 SUPERFAMILY Leucine zipper domain 151 213 IPR046347 GO:0003700|GO:0006355
Seca10g01040 233 Gene3D - 150 179 - -
Seca10g01040 233 Gene3D - 181 216 - -
Seca10g01040 233 MobiDBLite consensus disorder prediction 95 109 - -
Seca10g01040 233 MobiDBLite consensus disorder prediction 85 109 - -
Seca10g01040 233 CDD bZIP_plant_BZIP46 151 211 - -
Seca10g01040 233 SMART brlzneu 147 231 IPR004827 GO:0003700|GO:0006355
Seca10g01040 233 Pfam bZIP transcription factor 151 175 IPR004827 GO:0003700|GO:0006355
Seca10g01040 233 Coils Coil 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01040 Seca-Chr10 9873648 9874587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01040 1 172 bZIP Transcription Factor Family AT4G35900 38.172 8.21e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca10g01040 bZIP_1 2.1e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01040 K14432 - gmx:102660922 186.422