Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01027 ATGGCTGCCGCCGAACACAAACTAACCCTCGAACCTGAGAAACAGGGCCTTCTCAACCACCACACCGAGAAGCACTTCACCGCCGGCGAGATCGTCCGCGACATCATCATCGGCGTCTCCGACGGCCTCACCGTCCCCTTCGCCCTCGCCGCCGGCCTCTCCGGCGCCAATGCCACCTCCTCCATCGTCCTCACTGCCGGCATAGCCGAAGTCGCCGCCGGCGCCATCTCCATGGGTCTCGGCGGGTATTTGGCAGCAAAAAGCGAAGCTGATCATTATGCCAGAGAATTGAAGAGGGAGCAAGAAGAAATCATCGCCGTACCAGAAAGTGAAGCGGAAGAGGTGGCAGAAATATTGGCTGAATATGGGATAGAGCCACACGAATATGAACCTGTGGTGAATGCTCTCAGAAAGAAGCCTCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAAAAGCCAGATCCAAGGAGAGCATTGCATAGTGCAATGACAATTGCCATTGCTTACATATTGGGTGGGCTTGTTCCTCTCGTTCCTTACATGTTCATTCCAAAGGCAACAGAGGCAGTTGTATTTTCAGTGGTGGTTACCTTGGTTGCATTGCTTATCTTTGGTTTTGCCAAGGGATACTTCACCGGCAATAAACCTTTTAAGAGTGCTTTGGAAACTGCTCTAATTGGTGCCATTGCCTCTGCGGCTGCTTTCGGCATGGCAAAGGCTTTCCATTCATAG 744 0.5175 MAAAEHKLTLEPEKQGLLNHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYARELKREQEEIIAVPESEAEEVAEILAEYGIEPHEYEPVVNALRKKPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYILGGLVPLVPYMFIPKATEAVVFSVVVTLVALLIFGFAKGYFTGNKPFKSALETALIGAIASAAAFGMAKAFHS. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01027 247 Coils Coil 83 103 - -
Seca10g01027 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 245 IPR008217 GO:0005384|GO:0030026
Seca10g01027 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Seca10g01027 247 CDD CCC1 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01027 Seca-Chr10 9759176 9763007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01027 1 247 Nodulin-like Gene Family AT3G43660 24.194 4.51e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01027 K22736 - gmx:100793585 389.037