Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01025 ATGAAGTTTCCTCCTGTTAAATCTTTTTATGTCTATCCTGGCCTAGTTTTGTTTTATGCAAATGTCATTGTTGTTTTTCATTCAGCTGTTGTAACAGCCACATCACAGCCCAACAATATAAACATTACAGTTCCTGCTGTAATTGCTTTTGGTGATTCAATGTTGGATCCTGGCAACAATGACTACATCATCACAAAAGTAAAGGCAAATTTTAAACCATACGGGAGGGATTTCTTTGAGGGAAAACCCACGGGTAGATTCAGTGACGGCAAAATCCTCTCAGACTTCTTCGTTGAAAATGCGGGTGTGAAGGAGCTCTTGCCACCTTATCTTGATCCAAATTTGCAGCTTGAAGACCTCTTAACTGGTGTGAGTTTTGCCTCTGCTGGTGCAGGATATGATCATGTTACAAACATCATAGCAGTAATCCTCACTTCAGTACTGTCATTAGAGGATCAACTAGAGATGTTCAAAGATTACATTGAAAAGTTGAAGGTAGCTGTTGGGGAAGAAAGGACAGCTCTTGTTTTAGCAAAAAGCATATTCCTCCTTAGCATGGGATCAAATGACGTGTCAGAGAGATATTCCGTGACTGCATTCAGGAGATTTCACTATGATATCAATGAGTACACAAGTATGATGGTCAATGAGTCATCAAAATTTCAAAAGGAACTTTATCAATTGGGCGCAAGAAGGATTGGAGTGTTCAGCTTAAACCCAGTAGGGTGTTTGCCACTACAAAGGACAATAAATGGAGGCACAGAAAGAGTGTGTGCAGAATCAGTAAACCAAGCAGCCATGATCTTTAACTCTAAGCTTTCTTCTGCAATGAAGGATCTCAACAAACAACTTCCAGAGGCAAGGCTTGTCTATCTTGACATCTACTTTGAAACTCTTCCATATATCCAAAGCCCCTCTCTGTTTGGATTTGAAGTGGAGGATGAAGGGTGTTGTGGCATCTTCAATGTGGAATCTGGCCCTCTATGCAATCCTTTTCAGTTAAAAATCTGCACAGATGCCTCTAAATATGTATTCTGGGACGCTTATCACACTACCGAGAAGACTACCCAGATGCTTTGCTCACGAATTATCGAAAAGAACTTCTATAAGTTTTTCTGA 1119 0.4021 MKFPPVKSFYVYPGLVLFYANVIVVFHSAVVTATSQPNNINITVPAVIAFGDSMLDPGNNDYIITKVKANFKPYGRDFFEGKPTGRFSDGKILSDFFVENAGVKELLPPYLDPNLQLEDLLTGVSFASAGAGYDHVTNIIAVILTSVLSLEDQLEMFKDYIEKLKVAVGEERTALVLAKSIFLLSMGSNDVSERYSVTAFRRFHYDINEYTSMMVNESSKFQKELYQLGARRIGVFSLNPVGCLPLQRTINGGTERVCAESVNQAAMIFNSKLSSAMKDLNKQLPEARLVYLDIYFETLPYIQSPSLFGFEVEDEGCCGIFNVESGPLCNPFQLKICTDASKYVFWDAYHTTEKTTQMLCSRIIEKNFYKFF. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01025 372 Pfam GDSL-like Lipase/Acylhydrolase 47 359 IPR001087 GO:0016788
Seca10g01025 372 CDD SGNH_plant_lipase_like 45 369 IPR035669 -
Seca10g01025 372 PANTHER GDSL ESTERASE/LIPASE EXL3 27 362 - -
Seca10g01025 372 FunFam GDSL esterase/lipase APG 35 368 - -
Seca10g01025 372 Gene3D SGNH hydrolase 38 367 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01025 Seca-Chr10 9744481 9746396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01025 22 365 Pollen Coat Proteome AT1G75910 35.817 4.70e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01025 - - gsj:114370508 437.187