Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01022 ATGAAGCTTCTTCTTTTTCAGTTGCCTCTTGTAATTCTTTGCTTTCTGGCCATAGCTATAATCTCTCAACAATATGGTTGTGCTGTAAGTCTACCAAGCAATGAAACTGTCCCAGCATTCTTTGCCTTTGGGGACTCTATAGTTGATACGGGCAATAAGAACAACATCATCAATACTAGAATCAAGTGCAATTTTCTGCCTTATGGTAGAGATTTTGGTGTAGGAAATCGACCAACCGGGAGGTTCAGCAATGGTTTAGTCCCATCAGACATCATTGCTGCAAAATTTGGAGTCAAGAAGCTGTTGCCAGCTTATCTTGATCCAAATTTACAACTTCAAGATCTCCTCACAGGCATAAGCTTTGCCTCTGGAGATGCTGGATATGATCCTCTGACTTCTGAATTAGTGTCTGTGATATCATTATCAGATCAATTAGACATGTTCAGGAAGTACAAAAGGAAGATAAAGAAAGCAGTTGGAAAAATCAGAACAGCAATAATAATATCAAAGAGCATATACCTGGTGTGCATGGGAAGTGATGACATTGCCAACACTTGTTCTCAAACACCAATTAGGCGAGCATACTATGACATTCCATCATACACGGACTTAATGGCTTCAAAAGCCTCAAACTTCTTGCAGGAACTTTATGGATTAGGAGCTAGAAGGATTGGAGTAATTGGTTTGCCGGCTATAGGGTGCTTACCCTCACAGAGAACAATTAATGGAGGCATAGAGAGAGCGTGTTCAGATTCTGAAAACCAAGCAGCTATCCTCTTCAACACTAAGCTCTTATCTCAAATGGATGCCCTCAGAACAAAGTTTCCAGAGGCTAGACGTGTCTACCTTGATATTTACAACTCATCACTTGGTATTTGGGGGTAG 885 0.4068 MKLLLFQLPLVILCFLAIAIISQQYGCAVSLPSNETVPAFFAFGDSIVDTGNKNNIINTRIKCNFLPYGRDFGVGNRPTGRFSNGLVPSDIIAAKFGVKKLLPAYLDPNLQLQDLLTGISFASGDAGYDPLTSELVSVISLSDQLDMFRKYKRKIKKAVGKIRTAIIISKSIYLVCMGSDDIANTCSQTPIRRAYYDIPSYTDLMASKASNFLQELYGLGARRIGVIGLPAIGCLPSQRTINGGIERACSDSENQAAILFNTKLLSQMDALRTKFPEARRVYLDIYNSSLGIWG. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01022 294 Gene3D SGNH hydrolase 27 292 IPR036514 -
Seca10g01022 294 Pfam GDSL-like Lipase/Acylhydrolase 41 287 IPR001087 GO:0016788
Seca10g01022 294 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Seca10g01022 294 PANTHER GDSL ESTERASE/LIPASE EXL3 16 289 - -
Seca10g01022 294 CDD SGNH_plant_lipase_like 38 290 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01022 Seca-Chr10 9705287 9709181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01022 34 292 Pollen Coat Proteome AT1G75910 41.985 5.10e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01022 - - gmx:100810354 417.542