Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01019 ATGTTGTGCAACAGCAACGGTTACAGCCTAAAGACATGTTCAAATTCGTCAAGCTATATATTCTGGGACAGTTACCATCCTACCGAAGCAGCCTATAAGGTGCTTTGTTCCCTGTTTCCTCCTGTTAAATCTTTTTATGTCTATCCTGGCCTAGTTTTGTTTTATGCAAATGTCATTGTTGTTTTTCATTCAGTTGTTGTAACAGCCACATCACAGCCCAACAATATAAACATTACAGTTCCTGCTGTAATTGCTTTTGGTGATTCAATGTTGGATCCTGGCAACAATGACTACATCATCACAAAAGTGAAGGCAAATTTTAAACCATACGGGAGGGATTTCTTTGAGGGAAAACCAACGGGTAGATTCAGTAACGGCAAAATCCTCTCAGACTTCTTCGTTGAAAATGCGGGTGTGAAGGAGCTCTTGCCACCTTATCTTGATCCAAATTTGCAGCTTGAAGACCTCTTAACTGGTGTGAGTTTTGCCTCTGCTGGTGCAGGATATGATCATGTTACAAACATCATAGCATCAGTACTGTCATTAGAGGATCAACTAGAGATGTTCAAAGATTACATTGAAAAGTTGAAGGTAGCTGTTGGGGAAGAAAGGACAGCTCTTGTTTTAGCAAAAAGCATATTCCTCCTTAGCATGGGATCAAATGACGTGTCAGAGAGATATTCCGTGACTGCATTCAGGAGATTTCACTATGATATCAATGAGTACACAAGTATGCTGGTCAATGAGTCATCAAAATTTCAAAAGGAACTTTATCAATTGGGCGCAAGAAGGCTTGGAGTGTTCAGCTTAAACCCAGTAGGGTGTTTGCCACTACAAAGGACAATAAATGGAGGCACAGAAAGAGTGTGTGCAGAATCAGTAAACCAAGCAGCCATGATCTTTAACTCTAAGCTTTCTTCTGCAATGAAGGATCTTAACAAACAACTTCCAGAGGCAAGGCTTGTCTATCTTGACATCTACTTTGAAACTCTTCCATATATCCAAAGCCCCTCTCTGTTTGGATTTGAAGTGGAGGATGAAGGGTGTTGTGGCATCTTCAATGTGGAATCTGGCCCTCTATGCAATCCTTTTCAGTTAAAAATCTGCACAGATGCCTCTAAATATGTATTCTGGGACGCTTATCACACTACCGAGAAGACTACCCAGATACTTTGCTCACGAATTATCGAAAAGAACTTCTATAAGTTTTTCTGA 1215 0.4041 MLCNSNGYSLKTCSNSSSYIFWDSYHPTEAAYKVLCSLFPPVKSFYVYPGLVLFYANVIVVFHSVVVTATSQPNNINITVPAVIAFGDSMLDPGNNDYIITKVKANFKPYGRDFFEGKPTGRFSNGKILSDFFVENAGVKELLPPYLDPNLQLEDLLTGVSFASAGAGYDHVTNIIASVLSLEDQLEMFKDYIEKLKVAVGEERTALVLAKSIFLLSMGSNDVSERYSVTAFRRFHYDINEYTSMLVNESSKFQKELYQLGARRLGVFSLNPVGCLPLQRTINGGTERVCAESVNQAAMIFNSKLSSAMKDLNKQLPEARLVYLDIYFETLPYIQSPSLFGFEVEDEGCCGIFNVESGPLCNPFQLKICTDASKYVFWDAYHTTEKTTQILCSRIIEKNFYKFF. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01019 404 Gene3D SGNH hydrolase 1 40 IPR036514 -
Seca10g01019 404 Gene3D SGNH hydrolase 74 399 IPR036514 -
Seca10g01019 404 CDD SGNH_plant_lipase_like 81 399 IPR035669 -
Seca10g01019 404 FunFam GDSL esterase/lipase APG 71 400 - -
Seca10g01019 404 PANTHER GDSL ESTERASE/LIPASE EXL3 63 394 - -
Seca10g01019 404 Pfam GDSL-like Lipase/Acylhydrolase 83 393 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01019 Seca-Chr10 9687529 9694792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01019 58 397 Pollen Coat Proteome AT1G75910 36.522 2.44e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01019 - - ahf:112723705 450.669