Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01012 ATGAAGTTTCTCTTTCAAGAGCTTCTTTTTCAATTGCCTCTTGTCATTCTTTGGTGTCTTTCCATAGCCATCATCTCTCAACAACATGTTTGTGCAGTGAGTCTACCAAACAATGAAACTGTGCCAGCTGTCATTGTGTTTGGGGACTCTATAGTTGATCCTGGTAACAACAACTACATAAGCACTATTGTCAAATGCAATTTCCCACCATATGGTAGAGACTTTGCTGGAGGAAATCAACCAACAGGGAGGTTCAGCAATGGTTTAGTCCCATCAGACATCATTGCTGCAAAATTTGGAGTCAAGAAGCTTTTACCACCTTATCTTGATCCAAATCTTCAAATTCAGGATCTCCTCACAGGGGTAAGCTTTGCCTCTGGTGGTTCTGGATATGATCCTCTAACTTCTGAACTAGTGTCTGTGGCATCTTTATCAAATCAACTGGACATGTTCAGAGAGTACAAAGAGAAGATAAAGGGAGCAGTTGGAGAACTCAGAATGGCAAACATAATATCAAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCCAACACTTATTCTCAAACGCCAATTAGGCAATCACACTATGACATTCCATCATACACAAACTTAATGGTTTCACAAGCCTCAAACTTTTTGCAGGAACTTTATGGATTAGGAGCTAGAAGGATTGGAATAATTGGTTTGCCACCAATAGGGTGCGTGCCCTCACAGAGAACACTTGGTGGAGGTATACAGAGAGGGTGTTCTGATTCTGAAAACCAAGCAGCAATCCTCTTCAATACAAAGCTCTTATCTCAAATGGATGCCTTTAAAGAAAAGTTCCCAAAGGCTAGGCTTGTTTACCTTGATATTTACAACCCGTTACTGTATATTATTCAAAATCCTGCTAAATATGGTTTTAAAGTAGCAGACAAAGGATGCTGTGGCACTGGAAATATAGAAGTGAGCATATTGTGTAACCATTACAGCGTAAAAACATGTTCAGACTCATCAAGCTATATATTCTGGGACAGTTATCATCCTACGGAAGCAGCCTATGAGGTGCTTTGTTCCCTTCACAGAAACATGAAGCTTCTTCTTTTTCAGTTTCCTCCTGTAATCCTTTGCTTTCTGGCCATAGCTATAATCTCTCAACAATATGGTTGTGCTGTGAGTCTACCAAACAGTGAAACTGTCCCAGCATTCTTTGTCTTTGGGGACTCTATAGTTGATACGGGCAATAACAACAACATCAATACTAGAATCAAGTGCAATTTTCTGCCTTATGGTAGAGATTTTGGTGGAGGAAATCGACCAACCGGGAGGTTCAGCAATGGTTTAGTCCCATCAGACATCATTGCTGCAAAATTTGGAGTCAAGAAGCTGTTGCCAGCTTATCTTGATCCAAATTTACAACTTCAAGATCTCCTCACAGGCATAAGCTTTGCCTCTGGAGGTGCTGGATATGATCCTCTGACTTCTGAATTAGTGTCAGTACTGTCATTAGAGGATCAACTAGAGATGTTCAAAGATTACATTGAAAAGTTGAAGGTAGCTGTTGGGGAAGAAAAGACAGCTCTTGTTTTAGCAAAAAGCATATTCCTCCTTAGCATGGGATCAAATGACGTGTCAGAGAGATATTCCGTGACTGCATTCAGGAGATTTCACTATGATATCAATGAGTATACAAGTATGCTGGTCAATGAGTCATCAAAATTTCAAAAGGAACTTTATCAATTGGGCGCAAGAAGGATTGGAGTGTTCAGCTTAAACCCAGTAGGGTGTTTGCCACTACAAAGGACAATAAATGGAGGCACAGAAAGAGTGTGTGCAGAATCAGTAAACCAAGCAGCCATGATCTTTAACTCTAAGCTTTCTTCTGCAATCAAGGATCTCAACAAACAACTTCCAGAAGCAAGGCTTGTCTATCTTGACATCTACTTTGAAACTCTTCCATATATCCAAAGCCCCTCTCTGTTTGGATTTGAAGTGGAGGATGAAGGGTGTTGTGGCATCTTCAATGTGGAATCTGGCCCTCTATGCAATCCTTTTCAGTTAAAAATCTGCACAGATGCCTCTAAATATGTATTCTGGGACGCTTATCACACTACCGAGAAGACTACCCAGATACTTTGCTCACGAATTATCGAAAAGAACTTCTATAAGTTTTTCTGA 2166 0.403 MKFLFQELLFQLPLVILWCLSIAIISQQHVCAVSLPNNETVPAVIVFGDSIVDPGNNNYISTIVKCNFPPYGRDFAGGNQPTGRFSNGLVPSDIIAAKFGVKKLLPPYLDPNLQIQDLLTGVSFASGGSGYDPLTSELVSVASLSNQLDMFREYKEKIKGAVGELRMANIISKSIYIVCIGSDDIANTYSQTPIRQSHYDIPSYTNLMVSQASNFLQELYGLGARRIGIIGLPPIGCVPSQRTLGGGIQRGCSDSENQAAILFNTKLLSQMDAFKEKFPKARLVYLDIYNPLLYIIQNPAKYGFKVADKGCCGTGNIEVSILCNHYSVKTCSDSSSYIFWDSYHPTEAAYEVLCSLHRNMKLLLFQFPPVILCFLAIAIISQQYGCAVSLPNSETVPAFFVFGDSIVDTGNNNNINTRIKCNFLPYGRDFGGGNRPTGRFSNGLVPSDIIAAKFGVKKLLPAYLDPNLQLQDLLTGISFASGGAGYDPLTSELVSVLSLEDQLEMFKDYIEKLKVAVGEEKTALVLAKSIFLLSMGSNDVSERYSVTAFRRFHYDINEYTSMLVNESSKFQKELYQLGARRIGVFSLNPVGCLPLQRTINGGTERVCAESVNQAAMIFNSKLSSAIKDLNKQLPEARLVYLDIYFETLPYIQSPSLFGFEVEDEGCCGIFNVESGPLCNPFQLKICTDASKYVFWDAYHTTEKTTQILCSRIIEKNFYKFF. 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01012 721 FunFam GDSL esterase/lipase APG 388 717 - -
Seca10g01012 721 FunFam GDSL esterase/lipase APG 33 361 - -
Seca10g01012 721 PANTHER GDSL ESTERASE/LIPASE EXL3 23 354 - -
Seca10g01012 721 CDD SGNH_plant_lipase_like 42 353 IPR035669 -
Seca10g01012 721 CDD SGNH_plant_lipase_like 397 716 IPR035669 -
Seca10g01012 721 Gene3D SGNH hydrolase 387 716 IPR036514 -
Seca10g01012 721 Gene3D SGNH hydrolase 30 359 IPR036514 -
Seca10g01012 721 Pfam GDSL-like Lipase/Acylhydrolase 400 710 IPR001087 GO:0016788
Seca10g01012 721 Pfam GDSL-like Lipase/Acylhydrolase 44 353 IPR001087 GO:0016788
Seca10g01012 721 SUPERFAMILY SGNH hydrolase 175 355 - -
Seca10g01012 721 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 399 410 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01012 Seca-Chr10 9651838 9668271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01012 395 714 Pollen Coat Proteome AT1G75910 39.692 1.83e-68 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01012 - - ahf:112723705 862.062