Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00993 ATGGCACTGTCACCTCGTTGCCGTTGGTCGGCAATTGTCCTTCTTCCTTTTGTCTTCTGTAGCTCTGCAGCAGCAAAGGTTGTCACCCTTGATGTTCATGCAGCCAAGCGTCTCATCCAGACCGGCCACACTTATCTCGACGTCAGGACGGTGAAAGAGTTCATGAAAGGCCATGTCGATGCAGCTAAAATCTTTAACATTCCCTATATGTTAGACACACCCAAAGGCAGGGTGAAGAACCCTGACTTCCTCAAGGAGGTTTCATCTGCTTGCACCAAAGAAGACAATCTCATTGTGGGTTGCCAAAGTGGGGTAAGATCTCTGTATGCAACTACTGATCTTCTGGCTGATGGTTTTAAGAATGTGAACGACATGGGAGGAGGTTATCAGGACTGGGTTAGAAAGAAGTTTCCAGTGAATACACCAGTAACCAAAGAGGAGCTATAA 447 0.4676 MALSPRCRWSAIVLLPFVFCSSAAAKVVTLDVHAAKRLIQTGHTYLDVRTVKEFMKGHVDAAKIFNIPYMLDTPKGRVKNPDFLKEVSSACTKEDNLIVGCQSGVRSLYATTDLLADGFKNVNDMGGGYQDWVRKKFPVNTPVTKEEL. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00993 148 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 25 139 IPR036873 -
Seca10g00993 148 ProSiteProfiles Rhodanese domain profile. 39 141 IPR001763 -
Seca10g00993 148 SMART rhod_4 30 138 IPR001763 -
Seca10g00993 148 Gene3D - 19 140 IPR036873 -
Seca10g00993 148 CDD RHOD 34 133 - -
Seca10g00993 148 PANTHER THIOSULFATE SULFURTRANSFERASE 18 21 144 IPR044684 GO:0003824
Seca10g00993 148 Pfam Rhodanese-like domain 35 134 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00993 Seca-Chr10 9539224 9540833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00993 18 141 Sulfurtransferasese or Rhodanese AT5G66170 58.065 7.97e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00993 - K15692 gmx:100815122 222.631