Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00992 ATGTTGTTATTCCCTAGGTTTGCAGGTGGAAAATGGCTAGGATTTGTGACAGCCATATGGGTTCAAGCAATATGTGGAAACAATTATACTTTTGCCAATTACTCAGATGTATTGAAGAGCCTAATGGCTCTGAATCAGATGCAGCTTAACAATCTCTCTGTTGCCAAAGATGTTGGCAAGGCTTTTGGTGTTTTATCTGGTCTTGCTTCTGATCGTTGGCCAACTTCAGTTATTCTCATGATTGGAGCCATCATGGGATTCATAGGCTATGGAGTTCAATGGCTTGTTGTCAGCCAGAGAATCACTCCACTCCCTTATTGGCTGATGTGTATATTCTTGTGTATGGGTGGAAACAGCACAACATGGATGAACACAGCAGTGCTTGTGACTTGTATGAGGAATTTTCCACAAAACCGTGGCCCAATTTCTGGTATTCTCAAGGGTTATGTGGGACTCAGCACAGCAATCTTTACAGACATATGCACTGCTATGTTTTCTTCAGACCCTTCCAAGTTTCTTCTAATGCTTACCATTGTTCCTGCTGTCATTTGCTTTATTGCTGCTCTTTTCCTTCATGAGACCCCACCAGCTTCCACTACTTCAGAGGAAAATCAAGAAACCCAATTCTTCAATATTTTCAACTTGATTGCAGTTACAGTAGCTGTTTACCTCTTGGCCTTTGATATCTCTGGACCTCATGCCCATGTTCTTTCCTTGGTTTTCACAGCAGGACTTCTTGTCCTATTAGCCATGCCACTCCTTGTTCCTTTATACTTGGCCATCTTCAAATCAAATCTTAATGTTGACCAAGAACAACAACAGATTCATGAACCATTGCTAGCCCAAAAAATTTCAGCAGAAAAGGAAGAGGGACAGCAGGGTCATGAAGTAAATGCAGGCACAAAAGTGGAAGAAGTTGAAACAAAACAAAAACCTGTGTTAGGAGAAGAACATACCATCATTGAAATGGTAAAAACTGTTGATTTTTGGGTTTTGTTTGTGGCATTTCTCTGTGGAGTTGGAACAGGACTTTGTGTGATGAATAACATGGGGCAAATGGGACTAGCACTTGGTTACACTGATGTTTCTATTTTCATTTCCTTCATTAGCATATGGGGTTTCTTTGGACGCATTATTTCTGGCTCACTATCAGAATACTTCATCAGAAAATCAGGCATGCCAAGGCTAGTTTGGAATGCTGCTTCTCAAGTATTGATGGCTGTGGGTTACATTGCAATGGCATTGGCTTTGCCAGGATCACTTTACATTGGTTCAATGTTAGTGGGAATATGTTATGGAGTCCGTCTTACTATAACCCCAGCAGCAGCTTCAGAGCTATTTGGACTCAAATACTATGGTTTATTATATAACATCCTCATTCTCAACCTTCCTATTGGTTCATTCCTCTTTTCTGGTCTTATTGCTGGTTATCTTTATGATATGGAAGCCACTAGTGTGCCTGGAGGGGGAAACACTTGCATTGGAGCACATTGTTACATGCTTGTGTATGTGATTATGGCATTTGCTTGTGTCCTGGGATGTGGATTGGACCTGCTGTTGACAGTTAGAACAAAGAAAATCTATGCCAAGATACACCAAGAGAGGAGTCTAGTCAATTCCCAAGTTCAAAGCTGA 1635 0.411 MLLFPRFAGGKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALNQMQLNNLSVAKDVGKAFGVLSGLASDRWPTSVILMIGAIMGFIGYGVQWLVVSQRITPLPYWLMCIFLCMGGNSTTWMNTAVLVTCMRNFPQNRGPISGILKGYVGLSTAIFTDICTAMFSSDPSKFLLMLTIVPAVICFIAALFLHETPPASTTSEENQETQFFNIFNLIAVTVAVYLLAFDISGPHAHVLSLVFTAGLLVLLAMPLLVPLYLAIFKSNLNVDQEQQQIHEPLLAQKISAEKEEGQQGHEVNAGTKVEEVETKQKPVLGEEHTIIEMVKTVDFWVLFVAFLCGVGTGLCVMNNMGQMGLALGYTDVSIFISFISIWGFFGRIISGSLSEYFIRKSGMPRLVWNAASQVLMAVGYIAMALALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFLFSGLIAGYLYDMEATSVPGGGNTCIGAHCYMLVYVIMAFACVLGCGLDLLLTVRTKKIYAKIHQERSLVNSQVQS. 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00992 544 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 529 - -
Seca10g00992 544 SUPERFAMILY MFS general substrate transporter 31 526 IPR036259 -
Seca10g00992 544 Gene3D MFS general substrate transporter like domains 12 275 IPR036259 -
Seca10g00992 544 Gene3D MFS general substrate transporter like domains 291 524 IPR036259 -
Seca10g00992 544 CDD MFS_Mch1p_like 10 514 - -
Seca10g00992 544 Pfam Nodulin-like 11 257 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00992 Seca-Chr10 9531077 9533184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00992 11 540 Nodulin-like Gene Family AT4G34950 63.869 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00992 - - cit:102624072 751.51