Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g00957 | ATGCCTCCGTTACTTCTTCTTCTTCTCATGATGCTGTGCGCACCGTTCTTATCGTGCGCCGACCGAAGCGCTGAGATCCAAGCCTTGACGTCGTTCAAGCTCAACCTTCATGATCCTCTCGGAGCTCTCAACGGTTGGGATCCTTCGTCGCCGGTGGCGCCGTGTGACTGGCGCGGCGTTGCCTGCAATGACGACCGAGTCACGGAGCTTCGCTTGCCTCGCCTTCAACTCGGTGGTAGACTCAGTGACCGTCTTTCAGAGTTGCGCATGCTGCGCAAGATAAGCCTTCGTTCCAACTCCTTCAACGGTACCATTCCTTCGTCGCTCTCGAAATGCACGCTCCTACGCTCTGTGTTCTTGCAGGACAACTCATTTTCCGGTAACCTTCCGTCGGAGATCGGGAACATCACCGGCCTTCAGATTCTCAACGTTGCTCAGAATCGTCTCTCCGGTAGCGTCCCCGGCGAGCTTCCTCTCGGTCTCAAGTACCTCGACTTCTCGTCGAACGCCTTTTCCGGCGAGTTTCCGAGCAGCATTGCCAATCTCTCTCAGCTTCAGCTCATCAACCTGTCGTACAACCAGTTCTCCGGCGAGATTCCGGGGAGCTTCGGGGAGCTTCAGCAGCTGCAATACCTCTGGCTTGACCACAACTTGCTGGAAGGAACCCTTCCTTCGGCGCTCGCGAATTGCTCCTCGCTCGTGCATCTCAGCGCAGAAGGAAATGCACTTGGCGGCGTGGTCCCGTCGGCGATTTCGGCGCTTCCGAAGCTTCAGGTGTTGTCCCTCTCACAGAACAATTTCACTGGCTCCATTCCAGCTTCCGTTTTCTGTAATGTTTCGGTCTACGCGCCGTCGCTTCGGATTGTTCAACTTGGATTCAATGGTTTCACGGATTTCGTTGGACCTGAGTCCAACACGTGTTCCAGTGTTCTTCAGGTTTTGGATATTCGGCACAATCGCATACGGGGCACGTTTCCCTTGTGGTTAACCAATGTAACCACATTGTCAGTGCTTGATGTTTCGAGCAATGCACTTTCTGGTGAGATTCCGCCGCAGATAGTAAACCTCATCAAGTTGGAGGAATTGAAGATGGCTAATAATTCCTTTACTGGCATCATTCCGGTGGAAATCAAGAAATGTGGGTTCCTGAGTGTTGTTGATTTTGAAGGCAACGATTTTGGTGGAGAAGTCCCTTCGTTTTTCGGTGATATGATGGGCCTGAAGGTGCTATCCCTTGGTGGGAATCACTTCTCTGGTTCAGTTCCGGTGAGTTTTGCTAACCTTTCCTCTCTTGAAACCTTGAGTTTGAGTGGCAATAACTTAAATGGAAGTATGCCTGAGATGATAATGAGGTTGAGCAATTTGACAACACTGGACCTTAGTGGGAACAAGTTCACGGGTCAAATTTATGGCAGTATAGGGACTCTGAATCGGTTAATGGTTCTCAATCTGAGTGGCAATGGTTTCTCTGGAAAAATCCCTGCTAGTTTGGGAAATCTTTTCAGGCTAACTACACTTGACTTGAGCAAACAAAATCTCTCTGGAGAGTTACCTTTTGAGCTCTCTGGGCTGCCTAATCTGCAAGTTATTGCTCTGCAGGAGAACAAGTTATCTGGGGATGTACCTGAAGGGTTTAGCAGTTTGATGAGTTTGCAGTACCTGAACCTCAGTTCTAATGCTTTTTCTGGGCATATTCCTGAAAACTATGGCTTTCTTCGTTCGTTGGTTGTTCTTTCATTGTCTCATAATCACATTACAGGAACAATTCCTCCAGAAATTGGAAACTGCTCTGATATTGAAATTCTTGAGCTTGGATCAAATTCTTTGGCAGGTCATATTCCTGCTGATCTCTCTCGCCTCACCCATTTGAAAGTGCTTGATTTAGGTGGTAACAATTTAACTGGGGATATGCCTGGGGATATCTCCAAATGCTCGTCATTAACAGCTTTGTTAGTGGATCACAACCATCTTTCAGGTGCCATACCAGGGTCATTGTCAGATCTATCAAACCTAACAATGCTGGATCTCTCTGTTAACAACTTGAGTGGGGAAATTCCGAGTAACTTTTCTATGATCCATGGTTTGGTGTACTTCAATGTCTCAGGGAATAACCTCGAAGGTGAGATACCACCAACTTTGGGATCACGATTCAACAACTCCTCTGTATTTGCAGATAATCAGGGTTTATGTGGGAAGCCTTTGGAAACGAAGTGCGAAGATATAGACAGTAGGGACAAAAAGAGGTTGATTGTGTTGGTTATCATCATTGCATCCGGAGCTTGCCTCTTAGTCATGTTTTGCTGCTTCTATATCTTCAGCTTATTGAGATGGCGTAAGAAGCTGAAAGAGAGAGTTTCAGGGGAAAAGAAAAAGAGTCCTGCTAGAGCCAGTTCTGGAGCAAGTGGAGGCCGTGGCAGCAGTGATAATGGAGGGCCAAAACTTGTCATGTTCAACAACAAAATTACACTTGCTGAAACAATTGAAGCAACCAGACAATTCGACGAAGAGAATGTGCTGAGCAGAACAAGGTATGGATTAGTATTCAAGGCTTGCTACAACGATGGAATGGTCCTTTCCATTCGCAGGCTCCCTGATGGATCACTGGATGAGAACATGTTCAGGAAAGAAGCTGAATCACTAGGCAAAGTCAAGCACCGAAATTTAACCGTTCTCAGAGGTTACTATGCTGGGCCACCTGACATGAGACTCCTAGTCTACGATTACATGCCCAATGGAAACCTTGCAACCCTACTCCAAGAAGCTTCTCATCAAGATGGCCATGTTCTAAATTGGCCAATGAGACACCTCATTGCTCTAGGAATTGCCCGTGGTTTAGCCTTCATACACCAATCCTCAATGGTTCATGGGGACGTGAAACCGCAGAATGTTTTGTTCGATGCAGACTTCGAAGCCCATTTATCAGATTTTGGGTTAGAAAGTCTAACAGTAGCCACTCCAGGTGAAGCCTCCTCTTCAACTTCCGTTGGCACGGTGGGTTATGTATCCCCAGAAGCAATCTTAACCGGCGAAGCCACGAAAGAGTCTGATGTGTACAGCTTTGGCATTGTGTTGTTAGAGCTTCTGACAGGAAAGAGACCTGTAATGTTCACCCAGGATGAAGACATAGTGAAGTGGGTGAAAAAACAACTGCAGAGGGGTCAAATAACGGAGCTATTGGAACCAGGTTTGCTTGAGTTGGACCCAGAATCATCAGAGTGGGAAGAGTTCTTACTGGGTGTGAAAGTAGGGTTGCTTTGCACAGCACCAGACCCTTTTGATCGACCAACCATGTCTGACATCGTTTTCATGCTCGAGGGTTGCCGTGTCGGTCCTGATATCCCATCCTCCGCAGATCCCACCTCTCAACCTTCCCCGGCATAA | 3381 | 0.4753 | MPPLLLLLLMMLCAPFLSCADRSAEIQALTSFKLNLHDPLGALNGWDPSSPVAPCDWRGVACNDDRVTELRLPRLQLGGRLSDRLSELRMLRKISLRSNSFNGTIPSSLSKCTLLRSVFLQDNSFSGNLPSEIGNITGLQILNVAQNRLSGSVPGELPLGLKYLDFSSNAFSGEFPSSIANLSQLQLINLSYNQFSGEIPGSFGELQQLQYLWLDHNLLEGTLPSALANCSSLVHLSAEGNALGGVVPSAISALPKLQVLSLSQNNFTGSIPASVFCNVSVYAPSLRIVQLGFNGFTDFVGPESNTCSSVLQVLDIRHNRIRGTFPLWLTNVTTLSVLDVSSNALSGEIPPQIVNLIKLEELKMANNSFTGIIPVEIKKCGFLSVVDFEGNDFGGEVPSFFGDMMGLKVLSLGGNHFSGSVPVSFANLSSLETLSLSGNNLNGSMPEMIMRLSNLTTLDLSGNKFTGQIYGSIGTLNRLMVLNLSGNGFSGKIPASLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKLSGDVPEGFSSLMSLQYLNLSSNAFSGHIPENYGFLRSLVVLSLSHNHITGTIPPEIGNCSDIEILELGSNSLAGHIPADLSRLTHLKVLDLGGNNLTGDMPGDISKCSSLTALLVDHNHLSGAIPGSLSDLSNLTMLDLSVNNLSGEIPSNFSMIHGLVYFNVSGNNLEGEIPPTLGSRFNNSSVFADNQGLCGKPLETKCEDIDSRDKKRLIVLVIIIASGACLLVMFCCFYIFSLLRWRKKLKERVSGEKKKSPARASSGASGGRGSSDNGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFIHQSSMVHGDVKPQNVLFDADFEAHLSDFGLESLTVATPGEASSSTSVGTVGYVSPEAILTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPFDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA. | 1127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g00957 | 1126 | PANTHER | UNNAMED PRODUCT | 311 | 1037 | - | - | |
Seca10g00957 | 1126 | Gene3D | Phosphorylase Kinase; domain 1 | 809 | 908 | - | - | |
Seca10g00957 | 1126 | Gene3D | Ribonuclease Inhibitor | 22 | 157 | IPR032675 | - | |
Seca10g00957 | 1126 | SUPERFAMILY | Protein kinase-like (PK-like) | 812 | 1114 | IPR011009 | - | |
Seca10g00957 | 1126 | Pfam | Leucine rich repeat | 502 | 560 | IPR001611 | GO:0005515 | |
Seca10g00957 | 1126 | Pfam | Leucine rich repeat | 406 | 465 | IPR001611 | GO:0005515 | |
Seca10g00957 | 1126 | Pfam | Leucine rich repeat | 600 | 657 | IPR001611 | GO:0005515 | |
Seca10g00957 | 1126 | FunFam | Uncharacterized protein | 254 | 470 | - | - | |
Seca10g00957 | 1126 | Pfam | Leucine rich repeat N-terminal domain | 24 | 63 | IPR013210 | - | |
Seca10g00957 | 1126 | FunFam | Inactive leucine-rich repeat receptor-like protein kinase | 161 | 249 | - | - | |
Seca10g00957 | 1126 | ProSiteProfiles | Protein kinase domain profile. | 833 | 1113 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g00957 | 1126 | Pfam | Protein kinase domain | 843 | 1100 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g00957 | 1126 | SMART | LRR_sd22_2 | 332 | 358 | - | - | |
Seca10g00957 | 1126 | SMART | LRR_sd22_2 | 668 | 691 | - | - | |
Seca10g00957 | 1126 | SMART | LRR_sd22_2 | 206 | 232 | - | - | |
Seca10g00957 | 1126 | SMART | LRR_sd22_2 | 254 | 281 | - | - | |
Seca10g00957 | 1126 | SMART | LRR_sd22_2 | 158 | 184 | - | - | |
Seca10g00957 | 1126 | SMART | LRR_sd22_2 | 620 | 649 | - | - | |
Seca10g00957 | 1126 | SMART | LRR_sd22_2 | 428 | 457 | - | - | |
Seca10g00957 | 1126 | SUPERFAMILY | RNI-like | 397 | 713 | - | - | |
Seca10g00957 | 1126 | Gene3D | Ribonuclease Inhibitor | 158 | 299 | IPR032675 | - | |
Seca10g00957 | 1126 | SUPERFAMILY | RNI-like | 68 | 395 | - | - | |
Seca10g00957 | 1126 | Pfam | Leucine Rich Repeat | 479 | 500 | IPR001611 | GO:0005515 | |
Seca10g00957 | 1126 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 909 | 1112 | - | - | |
Seca10g00957 | 1126 | MobiDBLite | consensus disorder prediction | 788 | 812 | - | - | |
Seca10g00957 | 1126 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 953 | 965 | IPR008271 | GO:0004672|GO:0006468 | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 572 | 596 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 332 | 356 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 668 | 691 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 206 | 229 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 620 | 644 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 476 | 500 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 254 | 278 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 88 | 112 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 524 | 547 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 182 | 205 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 404 | 427 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 428 | 451 | IPR003591 | - | |
Seca10g00957 | 1126 | SMART | LRR_typ_2 | 452 | 472 | IPR003591 | - | |
Seca10g00957 | 1126 | Gene3D | Ribonuclease Inhibitor | 448 | 747 | IPR032675 | - | |
Seca10g00957 | 1126 | FunFam | Nuclear pore complex protein NUP107 | 22 | 160 | - | - | |
Seca10g00957 | 1126 | FunFam | LRR receptor-like serine/threonine-protein kinase | 551 | 617 | - | - | |
Seca10g00957 | 1126 | SMART | serkin_6 | 833 | 1103 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g00957 | 1126 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 618 | 738 | - | - | |
Seca10g00957 | 1126 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 796 | 908 | - | - | |
Seca10g00957 | 1126 | FunFam | Uncharacterized protein | 472 | 550 | - | - | |
Seca10g00957 | 1126 | Gene3D | Ribonuclease Inhibitor | 300 | 380 | IPR032675 | - | |
Seca10g00957 | 1126 | Gene3D | Ribonuclease Inhibitor | 381 | 447 | IPR032675 | - | |
Seca10g00957 | 1126 | Gene3D | Transferase(Phosphotransferase) domain 1 | 909 | 1112 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g00957 | Seca-Chr10 | 9166777 | 9170157 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g00957 | 5 | 1126 | Receptor kinase-like Gene Family | AT4G36180 | 70.749 | 0.0 | 1546 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-3 | Seca10g00957 | Pkinase | 1e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g00957 | - | - | gmx:100795838 | 1911.73 |