Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00941 ATGGATTTTTCTTCGTTTCTAAAATCGCAAACCGTAGAGATGGAACCATTCCATATGGTTACCCTCTTCATCATCCCACTATTACTACTATTGGGCTTAGCATCTCGAATCCGCAAAAAGGCATCATATCCACCAGGACCAAGAGGGTTACCCATTATAGGCAACATGTTAATGATGGACCAATTAACCCACCGTGGTTTAGCGAACCTAGCCAAACAATACGGTGGCATCTTCCACCTCCGCATGGGGTTCCTCCACATGGTGGCTATTTCAGACCCAGACACAGCACGTCAAGTGCTACAAGTACAAGATAACATCTTCTCTAACCGTCCAGCTACCATAGCCATAAGCTACCTCACCTATGACCGTGCTGACATGGCCTTCGCTCATTATGGCCCTTTCTGGCGTCAGATGCGGAAGCTTTGCGTCATGAAACTCTTCAGTCGCAAACGTGCTGAGTCATGGCAATCCGTTAGAGATGAAGTAGACGACGCCGTTCGAACCGTTTCTGCCAACATCGGCAAACCGGTTAACATTGGGGAACTGGTTTTCAACCTTACAAAAAACATAATCTACCGTGCGGCTTTTGGTTCAAGCTCGAAGGAAGGGCAAGATGAGTTTATTGGGATACTCCAAGAGTTTTCGAAATTGTTTGGTGCATTCAACATAGCTGATTTCATTCCATACCTTGGGGGTATTGACCCTCAAGGGCTTAACACGAGGCTGGTGAAGGCTCGTGGAGCGTTGGATAGCTTCATAGATAATATTATCGATGAACACGTGGAGAAGAAGAGGGAGGTTGGTGTTGATGAAGAAACTGATATGGTGGATGAGTTGCTCGCTTTCTACAGTGAGGAGGCTAAGGTGAATAATGAATCGGATGATCTTCAGAATTCTATCAGACTCACTAAGGATAATATCAAAGCCATCATCATGGACGTGATGTTTGGAGGGACCGAGACAGTGGCGTCAGCGATCGAGTGGGCCATGGCAGAACTTATGAGAAGCCCAGAAGATTTGAAAAAGGTCCAACAAGAGCTGGTGAATGTTGTGGGCCTGGACCGCCGGGTCGAGGAGCCCGATTTCGAAAAACTCACCTATCTCAAATGTGCCCTCAAGGAGACCCTTCGCCTCCACCCACCCATCCCTCTCCTCCTCCATGAGACGGCGGAGGACACGACGGTCGCTGGCTACTTCATCCCCAAGAGGGCGCGTGTGATGATTAACGCGTGGGCCATCGGGAGGGACAAGAACTGCTGGGAGGAGCCCGATACCTTCAAGCCCGCCCGGTTCTTGAAAGTGGGCGTGCCCGACTTTAAAGGAAGCAACTTCGAGTTCATCCCATTCGGGTCGGGTCGTAGGTCATGTCCCGGGATGCAGCTGGGCCTCTACGCGCTGGACTTGGCGGTGGCCCACCTCCTTCACTGCTTCACGTGGGAGTTACCGGATGGAATGAAACCCAGTGAAATGGACATGAGTGACGTGTTTGGACTCACCGCTCCGAGGGCGAGTCGACTCGTTGCAATACCCACCAAGCGCGTTCTGTGCCCTCTCTCTTAG 1560 0.5051 MDFSSFLKSQTVEMEPFHMVTLFIIPLLLLLGLASRIRKKASYPPGPRGLPIIGNMLMMDQLTHRGLANLAKQYGGIFHLRMGFLHMVAISDPDTARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDDAVRTVSANIGKPVNIGELVFNLTKNIIYRAAFGSSSKEGQDEFIGILQEFSKLFGAFNIADFIPYLGGIDPQGLNTRLVKARGALDSFIDNIIDEHVEKKREVGVDEETDMVDELLAFYSEEAKVNNESDDLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDLKKVQQELVNVVGLDRRVEEPDFEKLTYLKCALKETLRLHPPIPLLLHETAEDTTVAGYFIPKRARVMINAWAIGRDKNCWEEPDTFKPARFLKVGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAIPTKRVLCPLS. 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00941 519 PANTHER CYTOCHROME P450 84A1-RELATED 15 518 - -
Seca10g00941 519 Pfam Cytochrome P450 44 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 CDD CYP71-like 73 506 - -
Seca10g00941 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 FunFam Cytochrome P450 84A1 36 512 - -
Seca10g00941 519 SUPERFAMILY Cytochrome P450 37 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 Gene3D Cytochrome P450 36 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Seca10g00941 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00941 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00941 Seca-Chr10 9039940 9043142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00941 51 518 Monolignol Biosynthesis Gene Families AT4G36220 78.436 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00941 K09755 - gmx:100783430 875.544